EnhancerDB
  1. Home
  2. Enhancers
  3. vista1581[chr1:52088228-52088763]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1581[chr1:52088228-52088763]
Back to top
Tissue distribution of vista1581
Back to top
Transcription factor that possibly regulate vista1581[chr1:52088228-52088763]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 52088054 52088594 EP300 UCSC Txn Factor no Conserved 107803544
chr1 52088086 52088462 JUND UCSC Txn Factor no Conserved 107803551
chr1 52088247 52088260 ELF1 JASPAR yes 28855289
chr1 52088247 52088260 ELF1 JASPAR yes 118289662
chr1 52088266 52088280 JUN JASPAR yes 28855290
chr1 52088266 52088280 JUN JASPAR yes 118289663
chr1 52088268 52088279 BATF JASPAR yes 28855291
chr1 52088268 52088279 BATF JASPAR yes 118289664
chr1 52088269 52088280 FOSL2 JASPAR yes 28855292
chr1 52088269 52088280 JUNB JASPAR yes 28855293
chr1 52088269 52088280 FOSL2 JASPAR yes 118289665
chr1 52088269 52088280 JUNB JASPAR yes 118289666
chr1 52088270 52088281 FOS JASPAR yes 28855294
chr1 52088270 52088281 FOSL1 JASPAR yes 28855295
chr1 52088270 52088281 JUND JASPAR yes 28855296
chr1 52088270 52088281 NFE2 JASPAR yes 28855297
chr1 52088270 52088281 FOS JASPAR yes 118289667
chr1 52088270 52088281 FOSL1 JASPAR yes 118289668
chr1 52088270 52088281 JUND JASPAR yes 118289669
chr1 52088270 52088281 NFE2 JASPAR yes 118289670
chr1 52088271 52088280 JDP2 JASPAR yes 28855298
chr1 52088271 52088280 JDP2 JASPAR yes 118289671
chr1 52088271 52088282 FOSL2 JASPAR yes 28855299
chr1 52088271 52088282 JUNB JASPAR yes 28855300
chr1 52088271 52088282 FOSL2 JASPAR yes 118289672
chr1 52088271 52088282 JUNB JASPAR yes 118289673
chr1 52088271 52088285 JUN JASPAR yes 28855301
chr1 52088271 52088285 JUN JASPAR yes 118289674
chr1 52088274 52088285 USF2 JASPAR yes 28855302
chr1 52088274 52088285 USF2 JASPAR yes 118289675
chr1 52088304 52088309 ETS2 TRANSFAC yes 28855303
chr1 52088304 52088309 ETS2 TRANSFAC yes 118289676
chr1 52088324 52088339 JUND JASPAR yes 28855304
chr1 52088324 52088339 JUND JASPAR yes 118289677
chr1 52088325 52088338 JUN JASPAR yes 28855305
chr1 52088325 52088338 JUN JASPAR yes 118289678
chr1 52088366 52088374 ISL2 JASPAR yes 28855306
chr1 52088366 52088374 ISL2 JASPAR yes 118289679
chr1 52088366 52088375 NKX3-2 JASPAR yes 28855307
chr1 52088366 52088375 NKX3-2 JASPAR yes 118289680
chr1 52088369 52088386 ESR1 JASPAR yes 28855308
chr1 52088369 52088386 ESR1 JASPAR yes 118289681
chr1 52088370 52088383 JUN JASPAR yes 28855309
chr1 52088370 52088383 JUN JASPAR yes 118289682
chr1 52088378 52088389 NFE2L2 JASPAR yes 28855310
chr1 52088378 52088389 NFE2L2 JASPAR yes 118289683
chr1 52088384 52088397 ZBTB18 JASPAR yes 28855311
chr1 52088384 52088397 ZBTB18 JASPAR yes 118289684
chr1 52088385 52088395 MSC JASPAR yes 28855312
chr1 52088385 52088395 MSC JASPAR yes 118289685
chr1 52088391 52088405 TLX1 JASPAR yes 28855313
chr1 52088391 52088405 TLX1 JASPAR yes 118289686
chr1 52088411 52088425 SPI1 JASPAR yes 28855314
chr1 52088411 52088425 SPIC JASPAR yes 28855315
chr1 52088411 52088425 SPI1 JASPAR yes 118289687
chr1 52088411 52088425 SPIC JASPAR yes 118289688
chr1 52088412 52088425 ELF1 JASPAR yes 28855316
chr1 52088412 52088425 ELF1 JASPAR yes 118289689
chr1 52088415 52088422 SPIB JASPAR yes 28855317
chr1 52088415 52088422 SPIB JASPAR yes 118289690
chr1 52088428 52088446 SRF JASPAR yes 28855318
chr1 52088428 52088446 SRF JASPAR yes 118289691
chr1 52088432 52088442 HOXC10 JASPAR yes 28855319
chr1 52088432 52088442 HOXD11 JASPAR yes 28855320
chr1 52088432 52088442 HOXD13 JASPAR yes 28855321
chr1 52088432 52088442 HOXC10 JASPAR yes 118289692
chr1 52088432 52088442 HOXD11 JASPAR yes 118289693
chr1 52088432 52088442 HOXD13 JASPAR yes 118289694
chr1 52088432 52088443 HOXA10 JASPAR yes 28855322
chr1 52088432 52088443 HOXC11 JASPAR yes 28855323
chr1 52088432 52088443 HOXC12 JASPAR yes 28855324
chr1 52088432 52088443 HOXD12 JASPAR yes 28855325
chr1 52088432 52088443 HOXA10 JASPAR yes 118289695
chr1 52088432 52088443 HOXC11 JASPAR yes 118289696
chr1 52088432 52088443 HOXC12 JASPAR yes 118289697
chr1 52088432 52088443 HOXD12 JASPAR yes 118289698
chr1 52088433 52088442 CDX1 JASPAR yes 28855326
chr1 52088433 52088442 CDX1 JASPAR yes 118289699
chr1 52088433 52088444 CDX2 JASPAR yes 28855327
chr1 52088433 52088444 CDX2 JASPAR yes 118289700
chr1 52088438 52088448 RORA JASPAR yes 28855328
chr1 52088438 52088448 RORA JASPAR yes 118289701
chr1 52088449 52088461 ZBTB7C JASPAR yes 28855329
chr1 52088449 52088461 ZBTB7C JASPAR yes 118289702
chr1 52088457 52088471 SPI1 JASPAR yes 28855330
chr1 52088457 52088471 SPI1 JASPAR yes 118289703
chr1 52088477 52088481 YY1 TRANSFAC yes 28855331
chr1 52088477 52088481 YY1 TRANSFAC yes 118289704
chr1 52088488 52088499 HOXA10 JASPAR yes 28855332
chr1 52088488 52088499 HOXA10 JASPAR yes 118289705
chr1 52088491 52088495 YY1 TRANSFAC yes 28855333
chr1 52088491 52088495 YY1 TRANSFAC yes 118289706
chr1 52088494 52088504 TEAD1 JASPAR yes 28855334
chr1 52088494 52088504 TEAD4 JASPAR yes 28855335
chr1 52088494 52088504 TEAD1 JASPAR yes 118289707
chr1 52088494 52088504 TEAD4 JASPAR yes 118289708
chr1 52088513 52088518 TFAP2A TRANSFAC yes 28855336
chr1 52088513 52088518 TFAP2A TRANSFAC yes 118289709
chr1 52088513 52088519 MZF1 JASPAR yes 28855337
chr1 52088513 52088519 MZF1 JASPAR yes 118289710
chr1 52088535 52088542 CEBPA TRANSFAC yes 28855338
chr1 52088535 52088542 CEBPA TRANSFAC yes 118289711
chr1 52088536 52088547 E2F6 JASPAR yes 28855339
chr1 52088536 52088547 E2F6 JASPAR yes 118289712
chr1 52088551 52088559 GATA3 JASPAR yes 28855340
chr1 52088551 52088559 GATA3 JASPAR yes 118289713
chr1 52088568 52088576 HOXA5 JASPAR yes 28855341
chr1 52088568 52088576 HOXA5 JASPAR yes 118289714
chr1 52088588 52088603 RUNX2 JASPAR yes 28855342
chr1 52088588 52088603 RUNX2 JASPAR yes 118289715
chr1 52088611 52088616 NFY TRANSFAC yes 28855343
chr1 52088611 52088616 NFY TRANSFAC yes 118289716
chr1 52088613 52088619 NFIC JASPAR yes 28855344
chr1 52088613 52088619 NFIC JASPAR yes 118289717
chr1 52088618 52088625 SPIB JASPAR yes 28855345
chr1 52088618 52088625 SPIB JASPAR yes 118289718
chr1 52088638 52088653 PRDM1 JASPAR yes 28855346
chr1 52088638 52088653 PRDM1 JASPAR yes 118289719
chr1 52088658 52088673 LEF1 JASPAR yes 28855347
chr1 52088658 52088673 LEF1 JASPAR yes 118289720
chr1 52088661 52088682 IRF1 JASPAR yes 28855348
chr1 52088661 52088682 IRF1 JASPAR yes 118289721
chr1 52088667 52088688 IRF1 JASPAR yes 28855349
chr1 52088667 52088688 IRF1 JASPAR yes 118289722
chr1 52088679 52088689 TEAD1 JASPAR yes 28855350
chr1 52088679 52088689 TEAD4 JASPAR yes 28855351
chr1 52088679 52088689 TEAD1 JASPAR yes 118289723
chr1 52088679 52088689 TEAD4 JASPAR yes 118289724
chr1 52088684 52088697 SMAD2 JASPAR yes 28855352
chr1 52088684 52088697 SMAD2 JASPAR yes 118289725
chr1 52088698 52088704 YY1 JASPAR yes 28855353
chr1 52088698 52088704 YY1 JASPAR yes 118289726
chr1 52088712 52088723 HOXC12 JASPAR yes 28855354
chr1 52088712 52088723 HOXC12 JASPAR yes 118289727
chr1 52088740 52088750 GSC2 JASPAR yes 28855355
chr1 52088740 52088750 GSC2 JASPAR yes 118289728
chr1 52088741 52088749 OTX1 JASPAR yes 28855356
chr1 52088741 52088749 OTX2 JASPAR yes 28855357
chr1 52088741 52088749 OTX1 JASPAR yes 118289729
chr1 52088741 52088749 OTX2 JASPAR yes 118289730
SNP sites on vista1581[chr1:52088228-52088763]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 52088305 rs547120106 T G
EP300 ETS2 JUND
306639
chr1 52088367 rs571728910 T G
EP300 ISL2 JUND NKX3-2
306640
chr1 52088429 rs539125630 A G
EP300 JUND SRF
306641
chr1 52088449 rs568940484 A G
EP300 JUND ZBTB7C
306642
chr1 52088533 rs180701352 C T
EP300
306643
chr1 52088592 rs185323752 A G
EP300 RUNX2
306644
Genes possibly regulated by vista1581[chr1:52088228-52088763]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 52042851 52254889 + OSBPL9 ENSG00000117859.14 52042851 0.67 0.99 690 54623
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1581[chr1:52088228-52088763]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results