EnhancerDB
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  3. rs568940484[chr1:52088449]
Enhancers that have rs568940484[chr1:52088449]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52082245 52099655 enh11847
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 52088228 52088763 vista1581
VISTA
Transcript factors that have rs568940484[chr1:52088449]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52088054 52088594 EP300 UCSC Txn Factor no Conserved 107803544
chr1 52088054 52088594 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107803545
chr1 52088066 52088502 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803546
chr1 52088076 52088480 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803547
chr1 52088078 52088478 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803548
chr1 52088082 52088452 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803549
chr1 52088086 52088462 JUND UCSC Txn Factor no Conserved 107803551
chr1 52088087 52088497 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107803552
chr1 52088089 52088553 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107803553
chr1 52088098 52088494 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803554
chr1 52088099 52088515 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803555
chr1 52088103 52088462 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803556
chr1 52088106 52088562 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803557
chr1 52088110 52088450 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803559
chr1 52088110 52088646 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803560
chr1 52088119 52088559 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803562
chr1 52088123 52088487 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803564
chr1 52088131 52088707 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803565
chr1 52088148 52088484 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803569
chr1 52088152 52088522 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803571
chr1 52088160 52088484 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803573
chr1 52088160 52088510 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803574
chr1 52088183 52088459 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803580
chr1 52088191 52088595 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803582
chr1 52088204 52088514 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803583
chr1 52088211 52088467 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803586
chr1 52088222 52088502 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803589
chr1 52088226 52088506 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803591
chr1 52088345 52088508 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803594
chr1 52088449 52088461 ZBTB7C JASPAR yes 28855329
chr1 52088449 52088461 ZBTB7C JASPAR yes 118289702
Genes associated with rs568940484[chr1:52088449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More