EnhancerDB
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  3. vista1587[chr1:52238666-52238881]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1587[chr1:52238666-52238881]
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Tissue distribution of vista1587
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Transcription factor that possibly regulate vista1587[chr1:52238666-52238881]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 52238674 52238686 MEF2A JASPAR yes 118289941
chr1 52238674 52238686 MEF2B JASPAR yes 118289942
chr1 52238674 52238686 MEF2D JASPAR yes 118289943
chr1 52238675 52238685 MEF2A JASPAR yes 118289944
chr1 52238709 52238730 ZNF263 JASPAR yes 118289945
chr1 52238720 52238734 SPIC JASPAR yes 118289946
chr1 52238723 52238730 SPIB JASPAR yes 118289947
chr1 52238746 52238758 POU2F1 JASPAR yes 118289948
chr1 52238746 52238759 POU3F3 JASPAR yes 118289949
chr1 52238746 52238760 POU1F1 JASPAR yes 118289950
chr1 52238747 52238759 POU3F1 JASPAR yes 118289951
chr1 52238747 52238759 POU3F2 JASPAR yes 118289952
chr1 52238747 52238760 POU2F2 JASPAR yes 118289953
chr1 52238748 52238756 POU2F1 TRANSFAC yes 118289954
chr1 52238748 52238757 POU3F4 JASPAR yes 118289955
chr1 52238748 52238757 POU5F1B JASPAR yes 118289956
chr1 52238749 52238756 POU2F1 TRANSFAC yes 118289957
chr1 52238749 52238756 POU2F2 TRANSFAC yes 118289958
chr1 52238766 52238781 SCRT1 JASPAR yes 118289959
chr1 52238767 52238779 GRHL1 JASPAR yes 118289960
chr1 52238768 52238771 MYB TRANSFAC yes 118289961
chr1 52238770 52238776 PTF TRANSFAC yes 118289962
chr1 52238795 52238800 NFY TRANSFAC yes 118289963
chr1 52238798 52238812 SPIC JASPAR yes 118289964
chr1 52238811 52238824 POU2F2 JASPAR yes 118289965
chr1 52238824 52238841 RARA JASPAR yes 118289966
chr1 52238829 52238833 YY1 TRANSFAC yes 118289967
chr1 52238831 52238844 NR2F1 JASPAR yes 118289968
chr1 52238834 52238842 NR4A2 JASPAR yes 118289969
chr1 52238834 52238849 HNF4A JASPAR yes 118289970
chr1 52238835 52238847 PKNOX1 JASPAR yes 118289971
chr1 52238835 52238847 TGIF1 JASPAR yes 118289972
chr1 52238835 52238847 TGIF2 JASPAR yes 118289973
chr1 52238835 52238850 HNF4G JASPAR yes 118289974
chr1 52238841 52238845 NFE TRANSFAC yes 118289975
chr1 52238841 52238854 SMAD2 JASPAR yes 118289976
SNP sites on vista1587[chr1:52238666-52238881]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 52238693 rs572795718 C T no 307535
chr1 52238753 rs115748203 C T
POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B
307536
chr1 52238778 rs58123375 T C
GRHL1 SCRT1
307537
chr1 52238781 rs145679127 G T
SCRT1
307538
Genes possibly regulated by vista1587[chr1:52238666-52238881]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1587[chr1:52238666-52238881]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results