EnhancerDB
  1. Home
  2. SNP
  3. rs145679127[chr1:52238781]
Enhancers that have rs145679127[chr1:52238781]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52238666 52238881 vista1587
VISTA
Transcript factors that have rs145679127[chr1:52238781]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52237250 52239841 ZBTB33 GTRD no Brain (SK-N-SH) 107803614
chr1 52237752 52241360 ZNF274 GTRD no Bone Marrow (K562) 107803615
chr1 52238210 52239076 ZNF274 GTRD no Bone Marrow (K562) 107803616
chr1 52238226 52240010 ZBTB33 GTRD no Brain (SK-N-SH) 107803617
chr1 52238271 52239775 ZBTB33 GTRD no Brain (SK-N-SH) 107803618
chr1 52238274 52239714 ZBTB33 GTRD no Brain (SK-N-SH) 107803619
chr1 52238281 52238834 ZBTB33 GTRD no Brain (SK-N-SH) 107803620
chr1 52238295 52238989 ZBTB33 GTRD no Brain (SK-N-SH) 107803621
chr1 52238310 52238970 ZBTB33 GTRD no Brain (SK-N-SH) 107803622
chr1 52238320 52239088 ZNF274 GTRD no Bone Marrow (K562) 107803623
chr1 52238342 52238967 ZBTB33 GTRD no Brain (SK-N-SH) 107803624
chr1 52238355 52238980 ZBTB33 GTRD no Brain (SK-N-SH) 107803625
chr1 52238359 52239965 ZBTB33 GTRD no Brain (SK-N-SH) 107803626
chr1 52238498 52238823 ZNF274 GTRD no Bone Marrow (K562) 107803627
chr1 52238616 52240436 ZNF274 GTRD no Blood (GM12878) 107803628
chr1 52238663 52240466 ZNF274 GTRD no Blood (GM12878) 107803629
chr1 52238731 52240201 ZNF274 GTRD no Blood (GM12878) 107803630
chr1 52238766 52238781 SCRT1 JASPAR yes 118289959
Genes associated with rs145679127[chr1:52238781], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More