EnhancerDB
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  3. vista1604[chr1:53168640-53169047]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1604[chr1:53168640-53169047]
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Tissue distribution of vista1604
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Transcription factor that possibly regulate vista1604[chr1:53168640-53169047]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 53168563 53169259 JUND UCSC Txn Factor no Conserved 107803839
chr1 53168592 53169432 POLR2A UCSC Txn Factor no Conserved 107803841
chr1 53168604 53169253 ATF2 UCSC Txn Factor no Conserved 107803844
chr1 53168612 53168974 NFYB UCSC Txn Factor no Conserved 107803847
chr1 53168614 53168870 ATF1 UCSC Txn Factor no Conserved 107803849
chr1 53168808 53169245 MYC UCSC Txn Factor no Conserved 107803893
chr1 53168826 53169262 MAX UCSC Txn Factor no Conserved 107803897
chr1 53168909 53169233 CEBPB UCSC Txn Factor no Conserved 107803919
chr1 53168922 53169252 BHLHE40 UCSC Txn Factor no Conserved 107803924
chr1 53168934 53169243 USF2 UCSC Txn Factor no Conserved 107803928
chr1 53168959 53169215 USF1 UCSC Txn Factor no Conserved 107803937
chr1 53168642 53168647 H4TF1 TRANSFAC yes 28903106
chr1 53168642 53168647 H4TF1 TRANSFAC yes 118290814
chr1 53168647 53168667 ESR1 JASPAR yes 28903107
chr1 53168647 53168667 ESR1 JASPAR yes 118290815
chr1 53168650 53168668 ESR1 JASPAR yes 28903108
chr1 53168650 53168668 ESR1 JASPAR yes 118290816
chr1 53168652 53168667 ESR2 JASPAR yes 28903109
chr1 53168652 53168667 ESR2 JASPAR yes 118290817
chr1 53168653 53168657 ESR1 TRANSFAC yes 28903110
chr1 53168653 53168657 ESR1 TRANSFAC yes 118290818
chr1 53168705 53168710 SP1 TRANSFAC yes 28903111
chr1 53168705 53168710 SP1 TRANSFAC yes 118290819
chr1 53168705 53168711 SP1 TRANSFAC yes 28903112
chr1 53168705 53168711 SP1 TRANSFAC yes 118290820
chr1 53168720 53168735 NFYB JASPAR yes 28903113
chr1 53168720 53168735 NFYB JASPAR yes 118290821
chr1 53168722 53168738 NFYA JASPAR yes 28903114
chr1 53168722 53168738 NFYA JASPAR yes 118290822
chr1 53168723 53168741 NFYA JASPAR yes 28903115
chr1 53168723 53168741 NFYA JASPAR yes 118290823
chr1 53168727 53168731 H1TF2 TRANSFAC yes 28903116
chr1 53168727 53168731 NFE TRANSFAC yes 28903117
chr1 53168727 53168731 SRF TRANSFAC yes 28903118
chr1 53168727 53168731 H1TF2 TRANSFAC yes 118290824
chr1 53168727 53168731 NFE TRANSFAC yes 118290825
chr1 53168727 53168731 SRF TRANSFAC yes 118290826
chr1 53168738 53168753 JUND JASPAR yes 28903119
chr1 53168738 53168753 JUND JASPAR yes 118290827
chr1 53168739 53168752 JUN JASPAR yes 28903120
chr1 53168739 53168752 JUN JASPAR yes 118290828
chr1 53168741 53168756 JUND JASPAR yes 28903121
chr1 53168741 53168756 JUND JASPAR yes 118290829
chr1 53168743 53168751 CREB1 JASPAR yes 28903122
chr1 53168743 53168751 CREB1 JASPAR yes 118290830
chr1 53168744 53168752 NR4A2 JASPAR yes 28903123
chr1 53168744 53168752 NR4A2 JASPAR yes 118290831
chr1 53168746 53168750 ESR1 TRANSFAC yes 28903124
chr1 53168746 53168750 ESR1 TRANSFAC yes 118290832
chr1 53168765 53168770 NFY TRANSFAC yes 28903125
chr1 53168765 53168770 NFY TRANSFAC yes 118290833
chr1 53168777 53168787 SMAD3 JASPAR yes 28903126
chr1 53168777 53168787 SMAD3 JASPAR yes 118290834
chr1 53168810 53168822 NHLH1 JASPAR yes 28903127
chr1 53168810 53168822 NHLH1 JASPAR yes 118290835
chr1 53168844 53168854 NFKB1 JASPAR yes 28903128
chr1 53168844 53168854 NFKB1 JASPAR yes 118290836
chr1 53168844 53168855 NFKB1 JASPAR yes 28903129
chr1 53168844 53168855 NFKB1 JASPAR yes 118290837
chr1 53168858 53168877 CTCF JASPAR yes 28903130
chr1 53168858 53168877 CTCF JASPAR yes 118290838
chr1 53168873 53168887 EBF1 JASPAR yes 28903131
chr1 53168873 53168887 EBF1 JASPAR yes 118290839
chr1 53168874 53168888 PLAG1 JASPAR yes 28903132
chr1 53168874 53168888 PLAG1 JASPAR yes 118290840
chr1 53168882 53168900 MAFF JASPAR yes 28903133
chr1 53168882 53168900 MAFF JASPAR yes 118290841
chr1 53168883 53168898 MAFK JASPAR yes 28903134
chr1 53168883 53168898 MAFK JASPAR yes 118290842
chr1 53168887 53168898 NRL JASPAR yes 28903135
chr1 53168887 53168898 NRL JASPAR yes 118290843
chr1 53168891 53168906 RUNX2 JASPAR yes 28903136
chr1 53168891 53168906 RUNX2 JASPAR yes 118290844
chr1 53168891 53168908 ZNF410 JASPAR yes 28903137
chr1 53168891 53168908 ZNF410 JASPAR yes 118290845
chr1 53168892 53168896 YY1 TRANSFAC yes 28903138
chr1 53168892 53168896 YY1 TRANSFAC yes 118290846
chr1 53168895 53168905 RUNX3 JASPAR yes 28903139
chr1 53168895 53168905 RUNX3 JASPAR yes 118290847
chr1 53168915 53168920 SP1 TRANSFAC yes 28903140
chr1 53168915 53168920 SP1 TRANSFAC yes 118290848
chr1 53168915 53168936 ZNF263 JASPAR yes 28903141
chr1 53168915 53168936 ZNF263 JASPAR yes 118290849
chr1 53168922 53168933 FLI1 JASPAR yes 28903142
chr1 53168922 53168933 FLI1 JASPAR yes 118290850
chr1 53168923 53168936 ELF1 JASPAR yes 28903143
chr1 53168923 53168936 ELF1 JASPAR yes 118290851
chr1 53168924 53168932 EHF JASPAR yes 28903144
chr1 53168924 53168932 EHF JASPAR yes 118290852
chr1 53168978 53168999 ZNF263 JASPAR yes 28903145
chr1 53168978 53168999 ZNF263 JASPAR yes 118290853
chr1 53168979 53168987 EHF JASPAR yes 28903146
chr1 53168979 53168987 EHF JASPAR yes 118290854
chr1 53168982 53169003 ZNF263 JASPAR yes 28903147
chr1 53168982 53169003 ZNF263 JASPAR yes 118290855
chr1 53168984 53168994 SREBF1 JASPAR yes 28903148
chr1 53168984 53168994 SREBF2 JASPAR yes 28903149
chr1 53168984 53168994 SREBF1 JASPAR yes 118290856
chr1 53168984 53168994 SREBF2 JASPAR yes 118290857
chr1 53168988 53169009 ZNF263 JASPAR yes 28903150
chr1 53168988 53169009 ZNF263 JASPAR yes 118290858
chr1 53168996 53169006 MZF1 JASPAR yes 28903151
chr1 53168996 53169006 MZF1 JASPAR yes 118290859
chr1 53168997 53169003 MZF1 JASPAR yes 28903152
chr1 53168997 53169003 MZF1 JASPAR yes 118290860
chr1 53168998 53169008 SP1 JASPAR yes 28903153
chr1 53168998 53169008 SP1 JASPAR yes 118290861
chr1 53168999 53169009 SP1 JASPAR yes 28903154
chr1 53168999 53169009 SP1 JASPAR yes 118290862
chr1 53169026 53169034 MEIS2 JASPAR yes 28903155
chr1 53169026 53169034 MEIS3 JASPAR yes 28903156
chr1 53169026 53169034 MEIS2 JASPAR yes 118290863
chr1 53169026 53169034 MEIS3 JASPAR yes 118290864
chr1 53169027 53169039 PKNOX1 JASPAR yes 28903157
chr1 53169027 53169039 PKNOX2 JASPAR yes 28903158
chr1 53169027 53169039 TGIF1 JASPAR yes 28903159
chr1 53169027 53169039 TGIF2 JASPAR yes 28903160
chr1 53169027 53169039 PKNOX1 JASPAR yes 118290865
chr1 53169027 53169039 PKNOX2 JASPAR yes 118290866
chr1 53169027 53169039 TGIF1 JASPAR yes 118290867
chr1 53169027 53169039 TGIF2 JASPAR yes 118290868
chr1 53169028 53169038 MSC JASPAR yes 28903161
chr1 53169028 53169038 MYF6 JASPAR yes 28903162
chr1 53169028 53169038 MSC JASPAR yes 118290869
chr1 53169028 53169038 MYF6 JASPAR yes 118290870
chr1 53169038 53169054 SOX4 JASPAR yes 28903163
chr1 53169038 53169054 SOX4 JASPAR yes 118290871
chr1 53169043 53169054 NRF1 JASPAR yes 28903164
chr1 53169043 53169054 NRF1 JASPAR yes 118290872
SNP sites on vista1604[chr1:53168640-53169047]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 53168654 rs563687239 G T
ATF1 ATF2 ESR1 ESR2 JUND NFYB POLR2A
311009
chr1 53168701 rs140565688 A G
ATF1 ATF2 JUND NFYB POLR2A
311010
chr1 53168780 rs487646 T G
ATF1 ATF2 JUND NFYB POLR2A SMAD3
311011
chr1 53168842 rs269287 T C
ATF1 ATF2 JUND MAX MYC NFYB POLR2A
311012
chr1 53168979 rs72668645 C T
ATF2 BHLHE40 CEBPB EHF JUND MAX MYC POLR2A USF1 USF2 ZNF263
311013
chr1 53169009 rs370558231 C A,G
ATF2 BHLHE40 CEBPB JUND MAX MYC POLR2A SP1 USF1 USF2 ZNF263
311014
chr1 53169018 rs269286 A G
ATF2 BHLHE40 CEBPB JUND MAX MYC POLR2A USF1 USF2
311015
Genes possibly regulated by vista1604[chr1:53168640-53169047]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 53099016 53135355 + FAM159A ENSG00000182183.10 53099016 0.97 0.94 702 30376
chr1 53152508 53164038 - SELRC1 ENSG00000162377.4 53164038 0.77 0.99 703 95398
chr1 53192126 53293014 + ZYG11B ENSG00000162378.8 53192126 0.58 0.99 704 76921
Expression level of Genes
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miRNAs possibly regulated by vista1604[chr1:53168640-53169047]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results