EnhancerDB
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  3. vista1613[chr1:53589395-53589613]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1613[chr1:53589395-53589613]
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Tissue distribution of vista1613
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Transcription factor that possibly regulate vista1613[chr1:53589395-53589613]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 53589402 53589407 GATA2 JASPAR yes 28913165
chr1 53589402 53589407 GATA2 JASPAR yes 118291140
chr1 53589450 53589461 GCM1 JASPAR yes 28913166
chr1 53589450 53589461 GCM1 JASPAR yes 118291141
chr1 53589485 53589496 BATF JASPAR yes 28913167
chr1 53589485 53589496 BATF JASPAR yes 118291142
chr1 53589486 53589497 FOSL2 JASPAR yes 28913168
chr1 53589486 53589497 JUNB JASPAR yes 28913169
chr1 53589486 53589497 FOSL2 JASPAR yes 118291143
chr1 53589486 53589497 JUNB JASPAR yes 118291144
chr1 53589487 53589498 FOSL1 JASPAR yes 28913170
chr1 53589487 53589498 FOSL1 JASPAR yes 118291145
chr1 53589489 53589495 JUN TRANSFAC yes 28913171
chr1 53589489 53589495 JUN TRANSFAC yes 118291146
chr1 53589512 53589516 LFA1 TRANSFAC yes 28913172
chr1 53589512 53589516 LFA1 TRANSFAC yes 118291147
chr1 53589532 53589536 H4TF2 TRANSFAC yes 28913173
chr1 53589532 53589536 H4TF2 TRANSFAC yes 118291148
chr1 53589543 53589551 MGA JASPAR yes 28913174
chr1 53589543 53589551 MGA JASPAR yes 118291149
chr1 53589546 53589559 HSF4 JASPAR yes 28913175
chr1 53589546 53589559 HSF4 JASPAR yes 118291150
chr1 53589563 53589582 PAX5 JASPAR yes 28913176
chr1 53589563 53589582 PAX5 JASPAR yes 118291151
chr1 53589582 53589594 INSM1 JASPAR yes 28913177
chr1 53589582 53589594 INSM1 JASPAR yes 118291152
chr1 53589598 53589602 LFA1 TRANSFAC yes 28913178
chr1 53589598 53589602 LFA1 TRANSFAC yes 118291153
chr1 53589610 53589625 AR JASPAR yes 28913179
chr1 53589610 53589625 AR JASPAR yes 118291154
chr1 53589610 53589627 NR3C1 JASPAR yes 28913180
chr1 53589610 53589627 NR3C2 JASPAR yes 28913181
chr1 53589610 53589627 NR3C1 JASPAR yes 118291155
chr1 53589610 53589627 NR3C2 JASPAR yes 118291156
chr1 53589612 53589627 AR JASPAR yes 28913182
chr1 53589612 53589627 AR JASPAR yes 118291157
SNP sites on vista1613[chr1:53589395-53589613]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 53589404 rs61768148 G T
GATA2
312296
chr1 53589419 rs1679974 C T no 312297
chr1 53589488 rs562462494 G A
BATF FOSL1 FOSL2 JUNB
312298
chr1 53589519 rs1679973 A G no 312299
chr1 53589541 rs186740562 G A no 312300
chr1 53589570 rs192041311 G A
PAX5
312301
Genes possibly regulated by vista1613[chr1:53589395-53589613]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 53527854 53551174 + PODN ENSG00000174348.9 53527854 0.89 1.0 708 38459
chr1 53552855 53608289 - SLC1A7 ENSG00000162383.7 53608289 0.86 0.94 709 81324
chr1 53662101 53679869 + CPT2 ENSG00000157184.5 53662101 0.86 0.99 710 27512
chr1 53679771 53686289 - C1orf123 ENSG00000162384.9 53686289 0.65 0.99 711 3324
Expression level of Genes
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miRNAs possibly regulated by vista1613[chr1:53589395-53589613]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results