EnhancerDB
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  3. rs562462494[chr1:53589488]
Enhancers that have rs562462494[chr1:53589488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53585345 53605635 enh11856
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Stomach Placenta Uterus Blood (T-cell) Heart
chr1 53589395 53589613 vista1613
VISTA
Transcript factors that have rs562462494[chr1:53589488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53589355 53589830 TCF7L2 GTRD no Colon (HCT116) 107803987
chr1 53589485 53589496 BATF JASPAR yes 28913167
chr1 53589485 53589496 BATF JASPAR yes 118291142
chr1 53589486 53589497 FOSL2 JASPAR yes 28913168
chr1 53589486 53589497 JUNB JASPAR yes 28913169
chr1 53589486 53589497 FOSL2 JASPAR yes 118291143
chr1 53589486 53589497 JUNB JASPAR yes 118291144
chr1 53589487 53589498 FOSL1 JASPAR yes 28913170
chr1 53589487 53589498 FOSL1 JASPAR yes 118291145
Genes associated with rs562462494[chr1:53589488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More