EnhancerDB
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  3. vista1649[chr1:54778588-54778715]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1649[chr1:54778588-54778715]
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Tissue distribution of vista1649
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Transcription factor that possibly regulate vista1649[chr1:54778588-54778715]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54778532 54778830 USF1 UCSC Txn Factor no Conserved 107804774
chr1 54778586 54778607 ZNF263 JASPAR yes 28972082
chr1 54778586 54778607 ZNF263 JASPAR yes 118292447
chr1 54778597 54778608 E2F6 JASPAR yes 28972083
chr1 54778597 54778608 E2F6 JASPAR yes 118292448
chr1 54778599 54778620 ZNF263 JASPAR yes 28972084
chr1 54778599 54778620 ZNF263 JASPAR yes 118292449
chr1 54778602 54778623 ZNF263 JASPAR yes 28972085
chr1 54778602 54778623 ZNF263 JASPAR yes 118292450
chr1 54778603 54778617 PLAG1 JASPAR yes 28972086
chr1 54778603 54778617 PLAG1 JASPAR yes 118292451
chr1 54778604 54778623 CTCF JASPAR yes 28972087
chr1 54778604 54778623 CTCF JASPAR yes 118292452
chr1 54778610 54778631 ZNF263 JASPAR yes 28972088
chr1 54778610 54778631 ZNF263 JASPAR yes 118292453
chr1 54778611 54778621 ZNF740 JASPAR yes 28972089
chr1 54778611 54778621 ZNF740 JASPAR yes 118292454
chr1 54778613 54778634 ZNF263 JASPAR yes 28972090
chr1 54778613 54778634 ZNF263 JASPAR yes 118292455
chr1 54778616 54778621 SP1 TRANSFAC yes 28972091
chr1 54778616 54778621 SP1 TRANSFAC yes 118292456
chr1 54778617 54778627 SP1 JASPAR yes 28972092
chr1 54778617 54778627 SP1 JASPAR yes 118292457
chr1 54778624 54778629 ETS2 TRANSFAC yes 28972093
chr1 54778624 54778629 ETS2 TRANSFAC yes 118292458
chr1 54778627 54778632 ETS2 TRANSFAC yes 28972094
chr1 54778627 54778632 ETS2 TRANSFAC yes 118292459
chr1 54778628 54778643 AR JASPAR yes 28972095
chr1 54778628 54778643 AR JASPAR yes 118292460
chr1 54778637 54778641 NFE TRANSFAC yes 28972096
chr1 54778637 54778641 NFE TRANSFAC yes 118292461
chr1 54778653 54778673 ESR1 JASPAR yes 28972097
chr1 54778653 54778673 ESR1 JASPAR yes 118292462
chr1 54778657 54778675 ESR2 JASPAR yes 28972098
chr1 54778657 54778675 ESR2 JASPAR yes 118292463
chr1 54778668 54778679 NRF1 JASPAR yes 28972099
chr1 54778668 54778679 NRF1 JASPAR yes 118292464
chr1 54778676 54778683 USF1 JASPAR yes 28972100
chr1 54778676 54778683 USF1 JASPAR yes 118292465
chr1 54778677 54778682 MYC TRANSFAC yes 28972101
chr1 54778677 54778682 USF1 TRANSFAC yes 28972102
chr1 54778677 54778682 USF2 TRANSFAC yes 28972103
chr1 54778677 54778682 MYC TRANSFAC yes 118292466
chr1 54778677 54778682 USF1 TRANSFAC yes 118292467
chr1 54778677 54778682 USF2 TRANSFAC yes 118292468
chr1 54778682 54778697 TFAP2C JASPAR yes 28972104
chr1 54778682 54778697 TFAP2C JASPAR yes 118292469
chr1 54778687 54778708 IRF1 JASPAR yes 28972105
chr1 54778687 54778708 IRF1 JASPAR yes 118292470
chr1 54778690 54778711 IRF1 JASPAR yes 28972106
chr1 54778690 54778711 IRF1 JASPAR yes 118292471
chr1 54778691 54778712 IRF1 JASPAR yes 28972107
chr1 54778691 54778712 IRF1 JASPAR yes 118292472
chr1 54778692 54778707 FOXP1 JASPAR yes 28972108
chr1 54778692 54778707 FOXP1 JASPAR yes 118292473
chr1 54778692 54778713 IRF1 JASPAR yes 28972109
chr1 54778692 54778713 IRF1 JASPAR yes 118292474
chr1 54778693 54778708 FOXP1 JASPAR yes 28972110
chr1 54778693 54778708 FOXP1 JASPAR yes 118292475
chr1 54778693 54778714 IRF1 JASPAR yes 28972111
chr1 54778693 54778714 IRF1 JASPAR yes 118292476
chr1 54778694 54778709 FOXP1 JASPAR yes 28972112
chr1 54778694 54778709 FOXP1 JASPAR yes 118292477
chr1 54778694 54778715 IRF1 JASPAR yes 28972113
chr1 54778694 54778715 IRF1 JASPAR yes 118292478
chr1 54778695 54778710 FOXP1 JASPAR yes 28972114
chr1 54778695 54778710 FOXP1 JASPAR yes 118292479
chr1 54778696 54778711 FOXP1 JASPAR yes 28972115
chr1 54778696 54778711 FOXP1 JASPAR yes 118292480
chr1 54778697 54778712 FOXP1 JASPAR yes 28972116
chr1 54778697 54778712 FOXP1 JASPAR yes 118292481
chr1 54778697 54778718 IRF1 JASPAR yes 28972117
chr1 54778697 54778718 IRF1 JASPAR yes 118292482
chr1 54778698 54778713 FOXP1 JASPAR yes 28972118
chr1 54778698 54778713 FOXP1 JASPAR yes 118292483
chr1 54778698 54778719 IRF1 JASPAR yes 28972119
chr1 54778698 54778719 IRF1 JASPAR yes 118292484
chr1 54778699 54778714 FOXP1 JASPAR yes 28972120
chr1 54778699 54778714 FOXP1 JASPAR yes 118292485
chr1 54778700 54778715 FOXP1 JASPAR yes 28972121
chr1 54778700 54778715 FOXP1 JASPAR yes 118292486
chr1 54778704 54778719 FOXP1 JASPAR yes 28972122
chr1 54778704 54778719 FOXP1 JASPAR yes 118292487
chr1 54778708 54778718 NFATC3 JASPAR yes 28972123
chr1 54778708 54778718 NFATC3 JASPAR yes 118292488
chr1 54778709 54778716 NFATC2 JASPAR yes 28972124
chr1 54778709 54778716 NFATC2 JASPAR yes 118292489
SNP sites on vista1649[chr1:54778588-54778715]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54778693 rs534805502 CT C
FOXP1 IRF1 TFAP2C USF1
319296
Genes possibly regulated by vista1649[chr1:54778588-54778715]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54703710 54704736 + SSBP3-AS1 ENSG00000198711.4 54703710 0.82 0.95 731 25122
Expression level of Genes
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miRNAs possibly regulated by vista1649[chr1:54778588-54778715]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results