EnhancerDB
  1. Home
  2. Enhancers
  3. vista1657[chr1:54875187-54875373]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1657[chr1:54875187-54875373]
Back to top
Tissue distribution of vista1657
Back to top
Transcription factor that possibly regulate vista1657[chr1:54875187-54875373]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54875121 54875516 IRF1 UCSC Txn Factor no Conserved 107805079
chr1 54875178 54875193 PRDM1 JASPAR yes 28983295
chr1 54875178 54875193 PRDM1 JASPAR yes 118292806
chr1 54875185 54875196 E2F6 JASPAR yes 28983296
chr1 54875185 54875196 E2F6 JASPAR yes 118292807
chr1 54875196 54875206 SREBF1 JASPAR yes 28983297
chr1 54875196 54875206 SREBF2 JASPAR yes 28983298
chr1 54875196 54875206 SREBF1 JASPAR yes 118292808
chr1 54875196 54875206 SREBF2 JASPAR yes 118292809
chr1 54875201 54875209 SP1 TRANSFAC yes 28983299
chr1 54875201 54875209 SP1 TRANSFAC yes 118292810
chr1 54875229 54875243 GATA2 JASPAR yes 28983300
chr1 54875229 54875243 GATA2 JASPAR yes 118292811
chr1 54875231 54875239 GATA3 JASPAR yes 28983301
chr1 54875231 54875239 GATA5 JASPAR yes 28983302
chr1 54875231 54875239 GATA3 JASPAR yes 118292812
chr1 54875231 54875239 GATA5 JASPAR yes 118292813
chr1 54875235 54875240 ETS2 TRANSFAC yes 28983303
chr1 54875235 54875240 ETS2 TRANSFAC yes 118292814
chr1 54875242 54875247 GATA2 JASPAR yes 28983304
chr1 54875242 54875247 GATA2 JASPAR yes 118292815
chr1 54875251 54875260 SOX9 JASPAR yes 28983305
chr1 54875251 54875260 SOX9 JASPAR yes 118292816
chr1 54875264 54875272 GATA3 JASPAR yes 28983306
chr1 54875264 54875272 GATA5 JASPAR yes 28983307
chr1 54875264 54875272 GATA3 JASPAR yes 118292817
chr1 54875264 54875272 GATA5 JASPAR yes 118292818
chr1 54875309 54875319 ID4 JASPAR yes 28983308
chr1 54875309 54875319 TCF4 JASPAR yes 28983309
chr1 54875309 54875319 ID4 JASPAR yes 118292819
chr1 54875309 54875319 TCF4 JASPAR yes 118292820
chr1 54875311 54875316 USF2 TRANSFAC yes 28983310
chr1 54875311 54875316 USF2 TRANSFAC yes 118292821
chr1 54875315 54875330 HNF4A JASPAR yes 28983311
chr1 54875315 54875330 HNF4A JASPAR yes 118292822
chr1 54875316 54875331 HNF4G JASPAR yes 28983312
chr1 54875316 54875331 HNF4G JASPAR yes 118292823
chr1 54875321 54875339 IRF2 JASPAR yes 28983313
chr1 54875321 54875339 IRF2 JASPAR yes 118292824
chr1 54875322 54875343 IRF1 JASPAR yes 28983314
chr1 54875322 54875343 IRF1 JASPAR yes 118292825
chr1 54875324 54875339 STAT2 JASPAR yes 28983315
chr1 54875324 54875339 STAT2 JASPAR yes 118292826
chr1 54875325 54875339 STAT1 JASPAR yes 28983316
chr1 54875325 54875339 STAT1 JASPAR yes 118292827
chr1 54875326 54875338 IRF1 JASPAR yes 28983317
chr1 54875326 54875338 IRF1 JASPAR yes 118292828
chr1 54875326 54875340 IRF7 JASPAR yes 28983318
chr1 54875326 54875340 IRF8 JASPAR yes 28983319
chr1 54875326 54875340 IRF7 JASPAR yes 118292829
chr1 54875326 54875340 IRF8 JASPAR yes 118292830
chr1 54875326 54875341 IRF9 JASPAR yes 28983320
chr1 54875326 54875341 IRF9 JASPAR yes 118292831
chr1 54875352 54875356 YY1 TRANSFAC yes 28983321
chr1 54875352 54875356 YY1 TRANSFAC yes 118292832
chr1 54875352 54875365 EOMES JASPAR yes 28983322
chr1 54875352 54875365 EOMES JASPAR yes 118292833
chr1 54875354 54875364 TBR1 JASPAR yes 28983323
chr1 54875354 54875364 TBR1 JASPAR yes 118292834
chr1 54875354 54875365 TBX20 JASPAR yes 28983324
chr1 54875354 54875365 TBX2 JASPAR yes 28983325
chr1 54875354 54875365 TBX20 JASPAR yes 118292835
chr1 54875354 54875365 TBX2 JASPAR yes 118292836
chr1 54875355 54875365 TBX21 JASPAR yes 28983326
chr1 54875355 54875365 TBX21 JASPAR yes 118292837
chr1 54875362 54875368 ZNF354C JASPAR yes 28983327
chr1 54875362 54875368 ZNF354C JASPAR yes 118292838
chr1 54875368 54875379 FOS JASPAR yes 28983328
chr1 54875368 54875379 FOSL1 JASPAR yes 28983329
chr1 54875368 54875379 JUND JASPAR yes 28983330
chr1 54875368 54875379 FOS JASPAR yes 118292839
chr1 54875368 54875379 FOSL1 JASPAR yes 118292840
chr1 54875368 54875379 JUND JASPAR yes 118292841
chr1 54875369 54875378 JDP2 JASPAR yes 28983331
chr1 54875369 54875378 JDP2 JASPAR yes 118292842
chr1 54875369 54875380 FOSL2 JASPAR yes 28983332
chr1 54875369 54875380 JUNB JASPAR yes 28983333
chr1 54875369 54875380 FOSL2 JASPAR yes 118292843
chr1 54875369 54875380 JUNB JASPAR yes 118292844
chr1 54875369 54875383 JUN JASPAR yes 28983334
chr1 54875369 54875383 JUN JASPAR yes 118292845
chr1 54875370 54875381 BATF JASPAR yes 28983335
chr1 54875370 54875381 BATF JASPAR yes 118292846
SNP sites on vista1657[chr1:54875187-54875373]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54875311 rs213495 A C
ID4 IRF1 TCF4 USF2
320433
Genes possibly regulated by vista1657[chr1:54875187-54875373]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0.79 1.0 730 96221
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1657[chr1:54875187-54875373]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results