EnhancerDB
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  3. rs213495[chr1:54875311]
Enhancers that have rs213495[chr1:54875311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54866345 54877955 enh11868
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Uterus Thymus
chr1 54875187 54875373 vista1657
VISTA
Transcript factors that have rs213495[chr1:54875311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54873803 54876283 AR GTRD no Prostate (PC-3) 107805050
chr1 54874821 54875371 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805051
chr1 54874879 54875343 TCF7L2 GTRD no Colon (HCT116) 107805052
chr1 54874891 54875347 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805053
chr1 54874953 54875566 ZBTB33 GTRD no Lung (A549) 107805055
chr1 54874961 54875406 ZBTB33 GTRD no Lung (A549) 107805056
chr1 54874969 54875375 ZBTB33 GTRD no Lung (A549) 107805057
chr1 54874978 54875395 ZNF143 GTRD no Epithelial (MCF-7) 107805058
chr1 54874995 54875399 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805060
chr1 54874995 54875564 ZBTB33 GTRD no Lung (A549) 107805061
chr1 54875000 54875494 ZBTB33 GTRD no Lung (A549) 107805062
chr1 54875010 54875503 ZBTB33 GTRD no Lung (A549) 107805063
chr1 54875016 54875570 ZBTB33 GTRD no Lung (A549) 107805064
chr1 54875017 54875387 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805065
chr1 54875020 54875570 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805066
chr1 54875029 54875485 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805068
chr1 54875048 54875328 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805069
chr1 54875065 54875341 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805071
chr1 54875073 54875640 ZBTB33 GTRD no Lung (A549) 107805072
chr1 54875075 54875613 ZBTB33 GTRD no Lung (A549) 107805073
chr1 54875096 54875672 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805074
chr1 54875097 54875553 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805075
chr1 54875113 54875603 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805076
chr1 54875119 54875509 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805077
chr1 54875121 54875481 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805078
chr1 54875121 54875516 IRF1 UCSC Txn Factor no Conserved 107805079
chr1 54875149 54875499 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805080
chr1 54875167 54875523 ZBTB33 GTRD no Lung (A549) 107805081
chr1 54875256 54875881 ZNF274 GTRD no Blood (GM12878) 107805082
chr1 54875309 54875319 ID4 JASPAR yes 28983308
chr1 54875309 54875319 TCF4 JASPAR yes 28983309
chr1 54875309 54875319 ID4 JASPAR yes 118292819
chr1 54875309 54875319 TCF4 JASPAR yes 118292820
chr1 54875311 54875316 USF2 TRANSFAC yes 28983310
chr1 54875311 54875316 USF2 TRANSFAC yes 118292821
Genes associated with rs213495[chr1:54875311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More