EnhancerDB
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  3. vista1661[chr1:54941159-54941412]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1661[chr1:54941159-54941412]
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Tissue distribution of vista1661
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Transcription factor that possibly regulate vista1661[chr1:54941159-54941412]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54941157 54941168 E2F6 JASPAR yes 28987728
chr1 54941157 54941168 E2F6 JASPAR yes 118293015
chr1 54941159 54941167 SP1 TRANSFAC yes 28987729
chr1 54941159 54941167 SP1 TRANSFAC yes 118293016
chr1 54941159 54941169 SP1 JASPAR yes 28987730
chr1 54941159 54941169 SP1 JASPAR yes 118293017
chr1 54941159 54941180 ZNF263 JASPAR yes 28987731
chr1 54941159 54941180 ZNF263 JASPAR yes 118293018
chr1 54941161 54941167 MAZ TRANSFAC yes 28987732
chr1 54941161 54941167 MAZ TRANSFAC yes 118293019
chr1 54941164 54941174 SP1 JASPAR yes 28987733
chr1 54941164 54941174 SP1 JASPAR yes 118293020
chr1 54941165 54941173 SP1 TRANSFAC yes 28987734
chr1 54941165 54941173 SP1 TRANSFAC yes 118293021
chr1 54941165 54941174 SP1 TRANSFAC yes 28987735
chr1 54941165 54941174 SP1 TRANSFAC yes 118293022
chr1 54941165 54941175 SP1 JASPAR yes 28987736
chr1 54941165 54941175 SP1 JASPAR yes 118293023
chr1 54941166 54941171 SP1 TRANSFAC yes 28987737
chr1 54941166 54941171 SP1 TRANSFAC yes 118293024
chr1 54941167 54941172 SP1 TRANSFAC yes 28987738
chr1 54941167 54941172 SP1 TRANSFAC yes 118293025
chr1 54941167 54941173 SP1 TRANSFAC yes 28987739
chr1 54941167 54941173 SP1 TRANSFAC yes 118293026
chr1 54941203 54941224 ZNF263 JASPAR yes 28987740
chr1 54941203 54941224 ZNF263 JASPAR yes 118293027
chr1 54941242 54941246 LFA1 TRANSFAC yes 28987741
chr1 54941242 54941246 LFA1 TRANSFAC yes 118293028
chr1 54941243 54941255 INSM1 JASPAR yes 28987742
chr1 54941243 54941255 INSM1 JASPAR yes 118293029
chr1 54941248 54941257 SP1 TRANSFAC yes 28987743
chr1 54941248 54941257 SP1 TRANSFAC yes 118293030
chr1 54941248 54941258 SP1 JASPAR yes 28987744
chr1 54941248 54941258 SP1 JASPAR yes 118293031
chr1 54941250 54941256 MAZ TRANSFAC yes 28987745
chr1 54941250 54941256 MAZ TRANSFAC yes 118293032
chr1 54941255 54941259 LFA1 TRANSFAC yes 28987746
chr1 54941255 54941259 LFA1 TRANSFAC yes 118293033
chr1 54941255 54941274 RFX2 JASPAR yes 28987747
chr1 54941255 54941274 RFX2 JASPAR yes 118293034
chr1 54941257 54941272 RFX5 JASPAR yes 28987748
chr1 54941257 54941272 RFX5 JASPAR yes 118293035
chr1 54941258 54941263 MYC TRANSFAC yes 28987749
chr1 54941258 54941263 MYC TRANSFAC yes 118293036
chr1 54941268 54941273 ETS2 TRANSFAC yes 28987750
chr1 54941268 54941273 ETS2 TRANSFAC yes 118293037
chr1 54941268 54941283 FOXP1 JASPAR yes 28987751
chr1 54941268 54941283 FOXP1 JASPAR yes 118293038
chr1 54941271 54941282 FOXP2 JASPAR yes 28987752
chr1 54941271 54941282 FOXP2 JASPAR yes 118293039
chr1 54941273 54941282 SRY JASPAR yes 28987753
chr1 54941273 54941282 SRY JASPAR yes 118293040
chr1 54941273 54941284 FOXA1 JASPAR yes 28987754
chr1 54941273 54941284 FOXA1 JASPAR yes 118293041
chr1 54941275 54941287 FOXI1 JASPAR yes 28987755
chr1 54941275 54941287 FOXI1 JASPAR yes 118293042
chr1 54941306 54941318 PKNOX2 JASPAR yes 28987756
chr1 54941306 54941318 PKNOX2 JASPAR yes 118293043
chr1 54941311 54941321 NFIA JASPAR yes 28987757
chr1 54941311 54941321 NFIA JASPAR yes 118293044
chr1 54941313 54941319 NFIC JASPAR yes 28987758
chr1 54941313 54941319 NFIC JASPAR yes 118293045
chr1 54941316 54941328 YY1 JASPAR yes 28987759
chr1 54941316 54941328 YY1 JASPAR yes 118293046
chr1 54941319 54941325 YY1 JASPAR yes 28987760
chr1 54941319 54941325 YY1 JASPAR yes 118293047
chr1 54941360 54941370 NFKB1 JASPAR yes 28987761
chr1 54941360 54941370 NFKB1 JASPAR yes 118293048
chr1 54941361 54941372 ELK4 JASPAR yes 28987762
chr1 54941361 54941372 FLI1 JASPAR yes 28987763
chr1 54941361 54941372 ELK4 JASPAR yes 118293049
chr1 54941361 54941372 FLI1 JASPAR yes 118293050
chr1 54941362 54941372 GABPA JASPAR yes 28987764
chr1 54941362 54941372 GABPA JASPAR yes 118293051
chr1 54941362 54941375 ELF1 JASPAR yes 28987765
chr1 54941362 54941375 ELF1 JASPAR yes 118293052
chr1 54941368 54941372 NFE TRANSFAC yes 28987766
chr1 54941368 54941372 NFE TRANSFAC yes 118293053
chr1 54941381 54941394 TFAP2A JASPAR yes 28987767
chr1 54941381 54941394 TFAP2A JASPAR yes 118293054
chr1 54941403 54941412 THAP1 JASPAR yes 28987768
chr1 54941403 54941412 THAP1 JASPAR yes 118293055
SNP sites on vista1661[chr1:54941159-54941412]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54941263 rs184172850 T G
MYC RFX2 RFX5
320975
chr1 54941325 rs528338871 CA C
YY1
320976
chr1 54941406 rs572427004 G C
THAP1
320977
Genes possibly regulated by vista1661[chr1:54941159-54941412]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0.79 1.0 730 37993
chr1 55007930 55104865 + ACOT11 ENSG00000162390.13 55007930 0.84 1.0 732 33482
Expression level of Genes
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miRNAs possibly regulated by vista1661[chr1:54941159-54941412]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results