EnhancerDB
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  3. rs572427004[chr1:54941406]
Enhancers that have rs572427004[chr1:54941406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54937905 54958655 enh11871
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Muscle (A673) Placenta Pancreas (Panc1) Uterus Thymus
chr1 54941159 54941412 vista1661
VISTA
Transcript factors that have rs572427004[chr1:54941406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54941076 54941746 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805105
chr1 54941085 54941421 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805106
chr1 54941093 54941417 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805108
chr1 54941115 54941525 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805110
chr1 54941195 54941439 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805111
chr1 54941403 54941412 THAP1 JASPAR yes 28987768
chr1 54941403 54941412 THAP1 JASPAR yes 118293055
Genes associated with rs572427004[chr1:54941406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More