EnhancerDB
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  3. vista1664[chr1:54956081-54956394]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1664[chr1:54956081-54956394]
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Tissue distribution of vista1664
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Transcription factor that possibly regulate vista1664[chr1:54956081-54956394]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54956069 54956081 PROX1 JASPAR yes 28989929
chr1 54956069 54956081 PROX1 JASPAR yes 118293188
chr1 54956073 54956086 SMAD2 JASPAR yes 28989930
chr1 54956073 54956086 SMAD2 JASPAR yes 118293189
chr1 54956085 54956100 ZIC3 JASPAR yes 28989931
chr1 54956085 54956100 ZIC4 JASPAR yes 28989932
chr1 54956085 54956100 ZIC3 JASPAR yes 118293190
chr1 54956085 54956100 ZIC4 JASPAR yes 118293191
chr1 54956086 54956100 ZIC1 JASPAR yes 28989933
chr1 54956086 54956100 ZIC1 JASPAR yes 118293192
chr1 54956087 54956091 H1TF2 TRANSFAC yes 28989934
chr1 54956087 54956091 NFE TRANSFAC yes 28989935
chr1 54956087 54956091 SRF TRANSFAC yes 28989936
chr1 54956087 54956091 H1TF2 TRANSFAC yes 118293193
chr1 54956087 54956091 NFE TRANSFAC yes 118293194
chr1 54956087 54956091 SRF TRANSFAC yes 118293195
chr1 54956110 54956129 PAX5 JASPAR yes 28989937
chr1 54956110 54956129 PAX5 JASPAR yes 118293196
chr1 54956111 54956117 SP1 TRANSFAC yes 28989938
chr1 54956111 54956117 SP1 TRANSFAC yes 118293197
chr1 54956111 54956121 SP1 JASPAR yes 28989939
chr1 54956111 54956121 SP1 JASPAR yes 118293198
chr1 54956116 54956124 EHF JASPAR yes 28989940
chr1 54956116 54956124 EHF JASPAR yes 118293199
chr1 54956131 54956136 SP1 TRANSFAC yes 28989941
chr1 54956131 54956136 SP1 TRANSFAC yes 118293200
chr1 54956132 54956147 NR2C2 JASPAR yes 28989942
chr1 54956132 54956147 NR2C2 JASPAR yes 118293201
chr1 54956132 54956153 ZNF263 JASPAR yes 28989943
chr1 54956132 54956153 ZNF263 JASPAR yes 118293202
chr1 54956133 54956154 ZNF263 JASPAR yes 28989944
chr1 54956133 54956154 ZNF263 JASPAR yes 118293203
chr1 54956179 54956190 E2F4 JASPAR yes 28989945
chr1 54956179 54956190 E2F6 JASPAR yes 28989946
chr1 54956179 54956190 E2F4 JASPAR yes 118293204
chr1 54956179 54956190 E2F6 JASPAR yes 118293205
chr1 54956179 54956200 ZNF263 JASPAR yes 28989947
chr1 54956179 54956200 ZNF263 JASPAR yes 118293206
chr1 54956180 54956191 E2F1 JASPAR yes 28989948
chr1 54956180 54956191 E2F1 JASPAR yes 118293207
chr1 54956180 54956201 ZNF263 JASPAR yes 28989949
chr1 54956180 54956201 ZNF263 JASPAR yes 118293208
chr1 54956187 54956208 ZNF263 JASPAR yes 28989950
chr1 54956187 54956208 ZNF263 JASPAR yes 118293209
chr1 54956190 54956201 FLI1 JASPAR yes 28989951
chr1 54956190 54956201 FLI1 JASPAR yes 118293210
chr1 54956191 54956201 SP1 JASPAR yes 28989952
chr1 54956191 54956201 SP1 JASPAR yes 118293211
chr1 54956192 54956200 EHF JASPAR yes 28989953
chr1 54956192 54956200 EHF JASPAR yes 118293212
chr1 54956195 54956206 E2F6 JASPAR yes 28989954
chr1 54956195 54956206 E2F6 JASPAR yes 118293213
chr1 54956202 54956215 TFAP2A JASPAR yes 28989955
chr1 54956202 54956215 TFAP2B JASPAR yes 28989956
chr1 54956202 54956215 TFAP2C JASPAR yes 28989957
chr1 54956202 54956215 TFAP2A JASPAR yes 118293214
chr1 54956202 54956215 TFAP2B JASPAR yes 118293215
chr1 54956202 54956215 TFAP2C JASPAR yes 118293216
chr1 54956222 54956227 SP1 TRANSFAC yes 28989958
chr1 54956222 54956227 SP1 TRANSFAC yes 118293217
chr1 54956222 54956228 SP1 TRANSFAC yes 28989959
chr1 54956222 54956228 SP1 TRANSFAC yes 118293218
chr1 54956222 54956243 ZNF263 JASPAR yes 28989960
chr1 54956222 54956243 ZNF263 JASPAR yes 118293219
chr1 54956223 54956244 ZNF263 JASPAR yes 28989961
chr1 54956223 54956244 ZNF263 JASPAR yes 118293220
chr1 54956225 54956231 SP1 TRANSFAC yes 28989962
chr1 54956225 54956231 SP1 TRANSFAC yes 118293221
chr1 54956225 54956235 SP1 JASPAR yes 28989963
chr1 54956225 54956235 SP1 JASPAR yes 118293222
chr1 54956226 54956237 E2F6 JASPAR yes 28989964
chr1 54956226 54956237 E2F6 JASPAR yes 118293223
chr1 54956226 54956247 ZNF263 JASPAR yes 28989965
chr1 54956226 54956247 ZNF263 JASPAR yes 118293224
chr1 54956227 54956248 ZNF263 JASPAR yes 28989966
chr1 54956227 54956248 ZNF263 JASPAR yes 118293225
chr1 54956229 54956250 ZNF263 JASPAR yes 28989967
chr1 54956229 54956250 ZNF263 JASPAR yes 118293226
chr1 54956230 54956241 E2F6 JASPAR yes 28989968
chr1 54956230 54956241 E2F6 JASPAR yes 118293227
chr1 54956230 54956251 ZNF263 JASPAR yes 28989969
chr1 54956230 54956251 ZNF263 JASPAR yes 118293228
chr1 54956231 54956252 ZNF263 JASPAR yes 28989970
chr1 54956231 54956252 ZNF263 JASPAR yes 118293229
chr1 54956232 54956253 ZNF263 JASPAR yes 28989971
chr1 54956232 54956253 ZNF263 JASPAR yes 118293230
chr1 54956234 54956245 E2F6 JASPAR yes 28989972
chr1 54956234 54956245 E2F6 JASPAR yes 118293231
chr1 54956234 54956255 ZNF263 JASPAR yes 28989973
chr1 54956234 54956255 ZNF263 JASPAR yes 118293232
chr1 54956235 54956256 ZNF263 JASPAR yes 28989974
chr1 54956235 54956256 ZNF263 JASPAR yes 118293233
chr1 54956236 54956257 ZNF263 JASPAR yes 28989975
chr1 54956236 54956257 ZNF263 JASPAR yes 118293234
chr1 54956237 54956258 ZNF263 JASPAR yes 28989976
chr1 54956237 54956258 ZNF263 JASPAR yes 118293235
chr1 54956238 54956249 E2F6 JASPAR yes 28989977
chr1 54956238 54956249 E2F6 JASPAR yes 118293236
chr1 54956238 54956259 ZNF263 JASPAR yes 28989978
chr1 54956238 54956259 ZNF263 JASPAR yes 118293237
chr1 54956239 54956260 ZNF263 JASPAR yes 28989979
chr1 54956239 54956260 ZNF263 JASPAR yes 118293238
chr1 54956240 54956261 ZNF263 JASPAR yes 28989980
chr1 54956240 54956261 ZNF263 JASPAR yes 118293239
chr1 54956241 54956262 ZNF263 JASPAR yes 28989981
chr1 54956241 54956262 ZNF263 JASPAR yes 118293240
chr1 54956242 54956263 ZNF263 JASPAR yes 28989982
chr1 54956242 54956263 ZNF263 JASPAR yes 118293241
chr1 54956243 54956264 ZNF263 JASPAR yes 28989983
chr1 54956243 54956264 ZNF263 JASPAR yes 118293242
chr1 54956244 54956265 ZNF263 JASPAR yes 28989984
chr1 54956244 54956265 ZNF263 JASPAR yes 118293243
chr1 54956245 54956266 ZNF263 JASPAR yes 28989985
chr1 54956245 54956266 ZNF263 JASPAR yes 118293244
chr1 54956246 54956252 SP1 TRANSFAC yes 28989986
chr1 54956246 54956252 SP1 TRANSFAC yes 118293245
chr1 54956246 54956256 SP1 JASPAR yes 28989987
chr1 54956246 54956256 SP1 TRANSFAC yes 28989988
chr1 54956246 54956256 SP1 JASPAR yes 118293246
chr1 54956246 54956256 SP1 TRANSFAC yes 118293247
chr1 54956246 54956267 ZNF263 JASPAR yes 28989989
chr1 54956246 54956267 ZNF263 JASPAR yes 118293248
chr1 54956247 54956268 ZNF263 JASPAR yes 28989990
chr1 54956247 54956268 ZNF263 JASPAR yes 118293249
chr1 54956251 54956257 SP1 TRANSFAC yes 28989991
chr1 54956251 54956257 SP1 TRANSFAC yes 118293250
chr1 54956251 54956261 SP1 JASPAR yes 28989992
chr1 54956251 54956261 SP1 TRANSFAC yes 28989993
chr1 54956251 54956261 SP1 JASPAR yes 118293251
chr1 54956251 54956261 SP1 TRANSFAC yes 118293252
chr1 54956256 54956262 SP1 TRANSFAC yes 28989994
chr1 54956256 54956262 SP1 TRANSFAC yes 118293253
chr1 54956256 54956266 SP1 JASPAR yes 28989995
chr1 54956256 54956266 SP1 TRANSFAC yes 28989996
chr1 54956256 54956266 SP1 JASPAR yes 118293254
chr1 54956256 54956266 SP1 TRANSFAC yes 118293255
chr1 54956260 54956273 TFAP2A JASPAR yes 28989997
chr1 54956260 54956273 TFAP2A JASPAR yes 118293256
chr1 54956261 54956267 SP1 TRANSFAC yes 28989998
chr1 54956261 54956267 SP1 TRANSFAC yes 118293257
chr1 54956290 54956296 MAZ TRANSFAC yes 28989999
chr1 54956290 54956296 MAZ TRANSFAC yes 118293258
chr1 54956290 54956301 E2F6 JASPAR yes 28990000
chr1 54956290 54956301 E2F6 JASPAR yes 118293259
chr1 54956302 54956316 TLX1 JASPAR yes 28990001
chr1 54956302 54956316 TLX1 JASPAR yes 118293260
chr1 54956303 54956317 TLX1 JASPAR yes 28990002
chr1 54956303 54956317 TLX1 JASPAR yes 118293261
chr1 54956309 54956328 PAX5 JASPAR yes 28990003
chr1 54956309 54956328 PAX5 JASPAR yes 118293262
chr1 54956331 54956345 EBF1 JASPAR yes 28990004
chr1 54956331 54956345 EBF1 JASPAR yes 118293263
chr1 54956333 54956344 EBF1 JASPAR yes 28990005
chr1 54956333 54956344 EBF1 JASPAR yes 118293264
chr1 54956337 54956342 TFAP2A TRANSFAC yes 28990006
chr1 54956337 54956342 TFAP2A TRANSFAC yes 118293265
chr1 54956337 54956343 MZF1 JASPAR yes 28990007
chr1 54956337 54956343 MZF1 JASPAR yes 118293266
chr1 54956337 54956358 ZNF263 JASPAR yes 28990008
chr1 54956337 54956358 ZNF263 JASPAR yes 118293267
chr1 54956339 54956344 ETS2 TRANSFAC yes 28990009
chr1 54956339 54956344 ETS2 TRANSFAC yes 118293268
chr1 54956380 54956384 NFE TRANSFAC yes 28990010
chr1 54956380 54956384 NFE TRANSFAC yes 118293269
SNP sites on vista1664[chr1:54956081-54956394]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54956114 rs532963311 C A
PAX5 SP1
321193
chr1 54956147 rs563455095 C T
NR2C2 ZNF263
321194
chr1 54956160 rs529317524 T G no 321195
chr1 54956214 rs370747004 C T
TFAP2A TFAP2B TFAP2C
321196
chr1 54956226 rs144503812 CCCCT C
E2F6 SP1 ZNF263
321197
chr1 54956232 rs528826976 C T
E2F6 SP1 ZNF263
321198
chr1 54956234 rs552049310 T C
E2F6 SP1 ZNF263
321199
chr1 54956254 rs185427234 C T
SP1 ZNF263
321200
chr1 54956262 rs1811666 C G,T
SP1 TFAP2A ZNF263
321201
chr1 54956307 rs557556434 C A
TLX1
321202
chr1 54956323 rs6698850 C G,T
PAX5
321203
chr1 54956347 rs564587802 C CGGGGT
ZNF263
321204
Genes possibly regulated by vista1664[chr1:54956081-54956394]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0.79 1.0 730 23071
chr1 55007930 55104865 + ACOT11 ENSG00000162390.13 55007930 0.84 1.0 732 48464
Expression level of Genes
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miRNAs possibly regulated by vista1664[chr1:54956081-54956394]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results