EnhancerDB
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  3. rs552049310[chr1:54956234]
Enhancers that have rs552049310[chr1:54956234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54937905 54958655 enh11871
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Muscle (A673) Placenta Pancreas (Panc1) Uterus Thymus
chr1 54956081 54956394 vista1664
VISTA
Transcript factors that have rs552049310[chr1:54956234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54956144 54956440 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107805273
chr1 54956222 54956243 ZNF263 JASPAR yes 28989960
chr1 54956222 54956243 ZNF263 JASPAR yes 118293219
chr1 54956223 54956244 ZNF263 JASPAR yes 28989961
chr1 54956223 54956244 ZNF263 JASPAR yes 118293220
chr1 54956223 54956703 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805274
chr1 54956225 54956235 SP1 JASPAR yes 28989963
chr1 54956225 54956235 SP1 JASPAR yes 118293222
chr1 54956226 54956237 E2F6 JASPAR yes 28989964
chr1 54956226 54956237 E2F6 JASPAR yes 118293223
chr1 54956226 54956247 ZNF263 JASPAR yes 28989965
chr1 54956226 54956247 ZNF263 JASPAR yes 118293224
chr1 54956227 54956248 ZNF263 JASPAR yes 28989966
chr1 54956227 54956248 ZNF263 JASPAR yes 118293225
chr1 54956229 54956250 ZNF263 JASPAR yes 28989967
chr1 54956229 54956250 ZNF263 JASPAR yes 118293226
chr1 54956230 54956241 E2F6 JASPAR yes 28989968
chr1 54956230 54956241 E2F6 JASPAR yes 118293227
chr1 54956230 54956251 ZNF263 JASPAR yes 28989969
chr1 54956230 54956251 ZNF263 JASPAR yes 118293228
chr1 54956231 54956252 ZNF263 JASPAR yes 28989970
chr1 54956231 54956252 ZNF263 JASPAR yes 118293229
chr1 54956232 54956253 ZNF263 JASPAR yes 28989971
chr1 54956232 54956253 ZNF263 JASPAR yes 118293230
chr1 54956234 54956245 E2F6 JASPAR yes 28989972
chr1 54956234 54956245 E2F6 JASPAR yes 118293231
chr1 54956234 54956255 ZNF263 JASPAR yes 28989973
chr1 54956234 54956255 ZNF263 JASPAR yes 118293232
Genes associated with rs552049310[chr1:54956234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More