EnhancerDB
  1. Home
  2. Enhancers
  3. vista1667[chr1:54965893-54966212]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1667[chr1:54965893-54966212]
Back to top
Tissue distribution of vista1667
Back to top
Transcription factor that possibly regulate vista1667[chr1:54965893-54966212]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54965895 54965900 SP1 TRANSFAC yes 118293406
chr1 54965906 54965927 ZNF263 JASPAR yes 118293407
chr1 54965908 54965918 SP1 JASPAR yes 118293408
chr1 54965912 54965920 SP1 TRANSFAC yes 118293409
chr1 54965912 54965920 WT1 TRANSFAC yes 118293410
chr1 54965914 54965921 SP1 TRANSFAC yes 118293411
chr1 54965914 54965924 SP1 JASPAR yes 118293412
chr1 54965915 54965923 SP1 TRANSFAC yes 118293413
chr1 54965916 54965921 SP1 TRANSFAC yes 118293414
chr1 54965916 54965927 E2F4 JASPAR yes 118293415
chr1 54965917 54965922 SP1 TRANSFAC yes 118293416
chr1 54965917 54965923 SP1 TRANSFAC yes 118293417
chr1 54965943 54965953 ID4 JASPAR yes 118293418
chr1 54965945 54965950 USF2 TRANSFAC yes 118293419
chr1 54965950 54965954 LFA1 TRANSFAC yes 118293420
chr1 54965960 54965973 ZBED1 JASPAR yes 118293421
chr1 54965961 54965966 GATA2 JASPAR yes 118293422
chr1 54965975 54965986 NRF1 JASPAR yes 118293423
chr1 54965992 54966001 ZEB1 JASPAR yes 118293424
chr1 54965992 54966007 SCRT1 JASPAR yes 118293425
chr1 54965994 54966007 SCRT2 JASPAR yes 118293426
chr1 54965996 54966002 PTF TRANSFAC yes 118293427
chr1 54966010 54966020 NKX2-3 JASPAR yes 118293428
chr1 54966011 54966020 NKX2-8 JASPAR yes 118293429
chr1 54966023 54966029 TCF4 TRANSFAC yes 118293430
chr1 54966041 54966045 LFA1 TRANSFAC yes 118293431
chr1 54966060 54966064 YY1 TRANSFAC yes 118293432
chr1 54966079 54966082 MYB TRANSFAC yes 118293433
chr1 54966085 54966089 YY1 TRANSFAC yes 118293434
chr1 54966108 54966119 EBF1 JASPAR yes 28990336
chr1 54966108 54966119 EBF1 JASPAR yes 118293435
chr1 54966131 54966137 ZNF354C JASPAR yes 28990337
chr1 54966131 54966137 ZNF354C JASPAR yes 118293436
chr1 54966134 54966139 NFY TRANSFAC yes 28990338
chr1 54966134 54966139 NFY TRANSFAC yes 118293437
chr1 54966174 54966195 IRF1 JASPAR yes 28990339
chr1 54966174 54966195 IRF1 JASPAR yes 118293438
chr1 54966177 54966198 IRF1 JASPAR yes 28990340
chr1 54966177 54966198 IRF1 JASPAR yes 118293439
chr1 54966178 54966199 IRF1 JASPAR yes 28990341
chr1 54966178 54966199 IRF1 JASPAR yes 118293440
chr1 54966179 54966200 IRF1 JASPAR yes 28990342
chr1 54966179 54966200 IRF1 JASPAR yes 118293441
chr1 54966180 54966195 FOXP1 JASPAR yes 28990343
chr1 54966180 54966195 FOXP1 JASPAR yes 118293442
chr1 54966180 54966201 IRF1 JASPAR yes 28990344
chr1 54966180 54966201 IRF1 JASPAR yes 118293443
chr1 54966181 54966202 IRF1 JASPAR yes 28990345
chr1 54966181 54966202 IRF1 JASPAR yes 118293444
chr1 54966182 54966197 FOXP1 JASPAR yes 28990346
chr1 54966182 54966197 FOXP1 JASPAR yes 118293445
chr1 54966182 54966203 IRF1 JASPAR yes 28990347
chr1 54966182 54966203 IRF1 JASPAR yes 118293446
chr1 54966183 54966198 FOXP1 JASPAR yes 28990348
chr1 54966183 54966198 FOXP1 JASPAR yes 118293447
chr1 54966183 54966204 IRF1 JASPAR yes 28990349
chr1 54966183 54966204 IRF1 JASPAR yes 118293448
chr1 54966184 54966199 FOXP1 JASPAR yes 28990350
chr1 54966184 54966199 FOXP1 JASPAR yes 118293449
chr1 54966184 54966205 IRF1 JASPAR yes 28990351
chr1 54966184 54966205 IRF1 JASPAR yes 118293450
chr1 54966185 54966200 FOXP1 JASPAR yes 28990352
chr1 54966185 54966200 FOXP1 JASPAR yes 118293451
chr1 54966185 54966206 IRF1 JASPAR yes 28990353
chr1 54966185 54966206 IRF1 JASPAR yes 118293452
chr1 54966186 54966201 FOXP1 JASPAR yes 28990354
chr1 54966186 54966201 FOXP1 JASPAR yes 118293453
chr1 54966186 54966207 IRF1 JASPAR yes 28990355
chr1 54966186 54966207 IRF1 JASPAR yes 118293454
chr1 54966187 54966202 FOXP1 JASPAR yes 28990356
chr1 54966187 54966202 FOXP1 JASPAR yes 118293455
chr1 54966187 54966208 IRF1 JASPAR yes 28990357
chr1 54966187 54966208 IRF1 JASPAR yes 118293456
chr1 54966188 54966203 FOXP1 JASPAR yes 28990358
chr1 54966188 54966203 FOXP1 JASPAR yes 118293457
chr1 54966188 54966209 IRF1 JASPAR yes 28990359
chr1 54966188 54966209 IRF1 JASPAR yes 118293458
chr1 54966189 54966204 FOXP1 JASPAR yes 28990360
chr1 54966189 54966204 FOXP1 JASPAR yes 118293459
chr1 54966189 54966210 IRF1 JASPAR yes 28990361
chr1 54966189 54966210 IRF1 JASPAR yes 118293460
chr1 54966190 54966205 FOXP1 JASPAR yes 28990362
chr1 54966190 54966205 FOXP1 JASPAR yes 118293461
chr1 54966190 54966211 IRF1 JASPAR yes 28990363
chr1 54966190 54966211 IRF1 JASPAR yes 118293462
chr1 54966191 54966206 FOXP1 JASPAR yes 28990364
chr1 54966191 54966206 FOXP1 JASPAR yes 118293463
chr1 54966192 54966207 FOXP1 JASPAR yes 28990365
chr1 54966192 54966207 FOXP1 JASPAR yes 118293464
chr1 54966193 54966208 FOXP1 JASPAR yes 28990366
chr1 54966193 54966208 FOXP1 JASPAR yes 118293465
chr1 54966194 54966209 FOXP1 JASPAR yes 28990367
chr1 54966194 54966209 FOXP1 JASPAR yes 118293466
chr1 54966195 54966210 FOXP1 JASPAR yes 28990368
chr1 54966195 54966210 FOXP1 JASPAR yes 118293467
chr1 54966196 54966211 FOXP1 JASPAR yes 28990369
chr1 54966196 54966211 FOXP1 JASPAR yes 118293468
chr1 54966197 54966212 FOXP1 JASPAR yes 28990370
chr1 54966197 54966212 FOXP1 JASPAR yes 118293469
chr1 54966198 54966213 FOXP1 JASPAR yes 28990371
chr1 54966198 54966213 FOXP1 JASPAR yes 118293470
SNP sites on vista1667[chr1:54965893-54966212]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54965975 rs544288003 G A
NRF1
321272
chr1 54966150 rs144728662 T G no 321273
chr1 54966165 rs299875 T C no 321274
Genes possibly regulated by vista1667[chr1:54965893-54966212]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0.79 1.0 730 13259
chr1 55007930 55104865 + ACOT11 ENSG00000162390.13 55007930 0.84 1.0 732 58282
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1667[chr1:54965893-54966212]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results