EnhancerDB
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  3. rs299875[chr1:54966165]
Enhancers that have rs299875[chr1:54966165]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54965893 54966212 vista1667
VISTA
chr1 54966105 54970255 enh103025
Peripheral Blood (MM.1S)
Transcript factors that have rs299875[chr1:54966165]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54965433 54966597 ZNF274 GTRD no Blood (GM12878) 107805294
chr1 54965433 54966597 ZNF274 GTRD no Blood (GM12878) 107805295
chr1 54965452 54966643 ZNF274 GTRD no Blood (GM12878) 107805298
chr1 54965452 54966643 ZNF274 GTRD no Blood (GM12878) 107805299
chr1 54965495 54966680 ZNF274 GTRD no Blood (GM12878) 107805300
chr1 54965495 54966680 ZNF274 GTRD no Blood (GM12878) 107805301
chr1 54965506 54966261 ZNF274 GTRD no Bone Marrow (K562) 107805302
chr1 54965506 54966261 ZNF274 GTRD no Bone Marrow (K562) 107805303
chr1 54965545 54966573 ZNF274 GTRD no Blood (GM12878) 107805304
chr1 54965545 54966573 ZNF274 GTRD no Blood (GM12878) 107805305
chr1 54965547 54966341 ZNF274 GTRD no Bone Marrow (K562) 107805306
chr1 54965547 54966341 ZNF274 GTRD no Bone Marrow (K562) 107805307
chr1 54965578 54966412 ZNF274 GTRD no Blood (GM12878) 107805308
chr1 54965578 54966412 ZNF274 GTRD no Blood (GM12878) 107805309
chr1 54965580 54966406 ZNF274 GTRD no Blood (GM12878) 107805310
chr1 54965580 54966406 ZNF274 GTRD no Blood (GM12878) 107805311
chr1 54965581 54966502 ZNF274 GTRD no Blood (GM12878) 107805312
chr1 54965581 54966502 ZNF274 GTRD no Blood (GM12878) 107805313
chr1 54965602 54966521 ZNF274 GTRD no Blood (GM12878) 107805314
chr1 54965602 54966521 ZNF274 GTRD no Blood (GM12878) 107805315
chr1 54965609 54966446 ZNF274 GTRD no Blood (GM12878) 107805316
chr1 54965609 54966446 ZNF274 GTRD no Blood (GM12878) 107805317
chr1 54965664 54966368 ZNF143 GTRD no Epithelial (MCF-7) 107805318
chr1 54965665 54966416 ZNF274 GTRD no Blood (GM12878) 107805319
chr1 54965680 54966448 ZNF274 GTRD no Blood (GM12878) 107805320
chr1 54965697 54966437 ZNF274 GTRD no Blood (GM12878) 107805321
chr1 54965743 54966432 ZNF274 GTRD no Blood (GM12878) 107805324
chr1 54965782 54966484 ZNF274 GTRD no Bone Marrow (K562) 107805325
chr1 54965809 54966457 ZNF274 GTRD no Cervix (HeLa-S3) 107805327
chr1 54965815 54966465 ZBTB33 GTRD no Brain (SK-N-SH) 107805328
chr1 54965823 54966453 ZNF274 GTRD no Blood (GM12878) 107805329
chr1 54965827 54966633 ZNF274 GTRD no Bone Marrow (K562) 107805331
chr1 54965828 54966402 ZNF274 GTRD no Blood (GM12878) 107805332
chr1 54965838 54966350 ZNF274 GTRD no Blood (GM12878) 107805333
chr1 54965838 54966415 ZNF274 GTRD no Bone Marrow (K562) 107805334
chr1 54965840 54966411 ZBTB33 GTRD no Lung (A549) 107805335
chr1 54965846 54966407 ZBTB33 GTRD no Brain (SK-N-SH) 107805336
chr1 54965849 54966531 ZNF274 GTRD no Blood (GM12878) 107805337
chr1 54965867 54966386 ZNF274 GTRD no Blood (GM12878) 107805338
chr1 54965869 54966398 ZBTB33 GTRD no Lung (A549) 107805339
chr1 54965889 54966448 ZNF274 GTRD no Blood (GM12878) 107805340
chr1 54965918 54966310 TCF7L2 GTRD no Colon (HCT116) 107805341
chr1 54965932 54966466 ZBTB33 GTRD no Lung (A549) 107805342
chr1 54965935 54966354 ZNF274 GTRD no Blood (GM12878) 107805343
chr1 54965988 54966428 ZNF274 GTRD no Bone Marrow (K562) 107805344
chr1 54966004 54966374 ZNF274 GTRD no Liver (HepG2) 107805345
chr1 54966019 54966379 ZNF274 GTRD no Blood (GM12878) 107805346
chr1 54966027 54966302 ZNF274 GTRD no Bone Marrow (K562) 107805347
chr1 54966031 54966363 ZNF274 GTRD no Blood (GM12878) 107805348
chr1 54966034 54966222 ZNF274 GTRD no Liver (HepG2) 107805349
Genes associated with rs299875[chr1:54966165], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 54497347 54519177 - TMEM59 ENSG00000116209.7 54519177 446988 Esophagus 0.00803833 722