EnhancerDB
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  3. vista1677[chr1:55431735-55431939]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1677[chr1:55431735-55431939]
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Tissue distribution of vista1677
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Transcription factor that possibly regulate vista1677[chr1:55431735-55431939]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 55431695 55431995 NFYB UCSC Txn Factor no Conserved 107805413
chr1 55431750 55431764 JUN JASPAR yes 29011431
chr1 55431750 55431764 JUN JASPAR yes 118293797
chr1 55431754 55431765 FOS JASPAR yes 29011432
chr1 55431754 55431765 JUND JASPAR yes 29011433
chr1 55431754 55431765 NFE2 JASPAR yes 29011434
chr1 55431754 55431765 FOS JASPAR yes 118293798
chr1 55431754 55431765 JUND JASPAR yes 118293799
chr1 55431754 55431765 NFE2 JASPAR yes 118293800
chr1 55431755 55431763 JUND TRANSFAC yes 29011435
chr1 55431755 55431763 JUND TRANSFAC yes 118293801
chr1 55431755 55431764 JDP2 JASPAR yes 29011436
chr1 55431755 55431764 JDP2 JASPAR yes 118293802
chr1 55431755 55431766 FOSL2 JASPAR yes 29011437
chr1 55431755 55431766 JUNB JASPAR yes 29011438
chr1 55431755 55431766 FOSL2 JASPAR yes 118293803
chr1 55431755 55431766 JUNB JASPAR yes 118293804
chr1 55431755 55431769 JUN JASPAR yes 29011439
chr1 55431755 55431769 JUN JASPAR yes 118293805
chr1 55431756 55431762 JUN TRANSFAC yes 29011440
chr1 55431756 55431762 JUN TRANSFAC yes 118293806
chr1 55431761 55431765 YY1 TRANSFAC yes 29011441
chr1 55431761 55431765 YY1 TRANSFAC yes 118293807
chr1 55431771 55431775 ESR1 TRANSFAC yes 29011442
chr1 55431771 55431775 ESR1 TRANSFAC yes 118293808
chr1 55431788 55431798 GABPA JASPAR yes 29011443
chr1 55431788 55431798 GABPA JASPAR yes 118293809
chr1 55431788 55431801 ELF1 JASPAR yes 29011444
chr1 55431788 55431801 ELF1 JASPAR yes 118293810
chr1 55431791 55431798 SPIB JASPAR yes 29011445
chr1 55431791 55431798 SPIB JASPAR yes 118293811
chr1 55431811 55431822 USF1 JASPAR yes 29011446
chr1 55431811 55431822 USF1 JASPAR yes 118293812
chr1 55431812 55431822 SREBF1 JASPAR yes 29011447
chr1 55431812 55431822 SREBF2 JASPAR yes 29011448
chr1 55431812 55431822 TFEC JASPAR yes 29011449
chr1 55431812 55431822 SREBF1 JASPAR yes 118293813
chr1 55431812 55431822 SREBF2 JASPAR yes 118293814
chr1 55431812 55431822 TFEC JASPAR yes 118293815
chr1 55431812 55431823 USF1 JASPAR yes 29011450
chr1 55431812 55431823 USF2 JASPAR yes 29011451
chr1 55431812 55431823 USF1 JASPAR yes 118293816
chr1 55431812 55431823 USF2 JASPAR yes 118293817
chr1 55431812 55431826 JUN JASPAR yes 29011452
chr1 55431812 55431826 JUN JASPAR yes 118293818
chr1 55431815 55431826 FOSL2 JASPAR yes 29011453
chr1 55431815 55431826 JUNB JASPAR yes 29011454
chr1 55431815 55431826 FOSL2 JASPAR yes 118293819
chr1 55431815 55431826 JUNB JASPAR yes 118293820
chr1 55431816 55431827 FOS JASPAR yes 29011455
chr1 55431816 55431827 FOSL1 JASPAR yes 29011456
chr1 55431816 55431827 JUND JASPAR yes 29011457
chr1 55431816 55431827 FOS JASPAR yes 118293821
chr1 55431816 55431827 FOSL1 JASPAR yes 118293822
chr1 55431816 55431827 JUND JASPAR yes 118293823
chr1 55431817 55431824 JUN TRANSFAC yes 29011458
chr1 55431817 55431824 JUN TRANSFAC yes 118293824
chr1 55431817 55431831 JUN JASPAR yes 29011459
chr1 55431817 55431831 JUN JASPAR yes 118293825
chr1 55431818 55431829 BATF JASPAR yes 29011460
chr1 55431818 55431829 BATF JASPAR yes 118293826
chr1 55431825 55431840 NFYB JASPAR yes 29011461
chr1 55431825 55431840 NFYB JASPAR yes 118293827
chr1 55431827 55431843 NFYA JASPAR yes 29011462
chr1 55431827 55431843 NFYA JASPAR yes 118293828
chr1 55431828 55431846 NFYA JASPAR yes 29011463
chr1 55431828 55431846 NFYA JASPAR yes 118293829
chr1 55431832 55431836 H1TF2 TRANSFAC yes 29011464
chr1 55431832 55431836 NFE TRANSFAC yes 29011465
chr1 55431832 55431836 SRF TRANSFAC yes 29011466
chr1 55431832 55431836 H1TF2 TRANSFAC yes 118293830
chr1 55431832 55431836 NFE TRANSFAC yes 118293831
chr1 55431832 55431836 SRF TRANSFAC yes 118293832
chr1 55431840 55431854 SPI1 JASPAR yes 29011467
chr1 55431840 55431854 SPI1 JASPAR yes 118293833
chr1 55431859 55431874 RUNX2 JASPAR yes 29011468
chr1 55431859 55431874 RUNX2 JASPAR yes 118293834
chr1 55431883 55431901 IRF2 JASPAR yes 29011469
chr1 55431883 55431901 IRF2 JASPAR yes 118293835
chr1 55431888 55431900 IRF1 JASPAR yes 29011470
chr1 55431888 55431900 IRF1 JASPAR yes 118293836
chr1 55431909 55431921 PKNOX2 JASPAR yes 29011471
chr1 55431909 55431921 PKNOX2 JASPAR yes 118293837
chr1 55431910 55431920 ID4 JASPAR yes 29011472
chr1 55431910 55431920 MSC JASPAR yes 29011473
chr1 55431910 55431920 MYF6 JASPAR yes 29011474
chr1 55431910 55431920 TFAP4 JASPAR yes 29011475
chr1 55431910 55431920 ID4 JASPAR yes 118293838
chr1 55431910 55431920 MSC JASPAR yes 118293839
chr1 55431910 55431920 MYF6 JASPAR yes 118293840
chr1 55431910 55431920 TFAP4 JASPAR yes 118293841
chr1 55431917 55431929 PBX1 JASPAR yes 29011476
chr1 55431917 55431929 PBX1 JASPAR yes 118293842
chr1 55431929 55431950 IRF1 JASPAR yes 29011477
chr1 55431929 55431950 IRF1 JASPAR yes 118293843
chr1 55431932 55431946 SPI1 JASPAR yes 29011478
chr1 55431932 55431946 SPIC JASPAR yes 29011479
chr1 55431932 55431946 SPI1 JASPAR yes 118293844
chr1 55431932 55431946 SPIC JASPAR yes 118293845
chr1 55431934 55431955 ZNF263 JASPAR yes 29011480
chr1 55431934 55431955 ZNF263 JASPAR yes 118293846
SNP sites on vista1677[chr1:55431735-55431939]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 55431750 rs12402488 C G
JUN NFYB
323835
chr1 55431896 rs564289396 C T
IRF1 IRF2 NFYB
323836
chr1 55431933 rs12043403 T C
IRF1 NFYB SPI1 SPIC
323837
Genes possibly regulated by vista1677[chr1:55431735-55431939]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 55315306 55352891 - DHCR24 ENSG00000116133.7 55352891 0.91 0.99 740 21156
chr1 55446465 55457966 + TMEM61 ENSG00000143001.4 55446465 0.91 1.0 741 85474
chr1 55464606 55476556 + BSND ENSG00000162399.6 55464606 1.0 0.98 742 67333
chr1 55505221 55530525 + PCSK9 ENSG00000169174.9 55505221 0.96 1.0 743 26718
Expression level of Genes
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miRNAs possibly regulated by vista1677[chr1:55431735-55431939]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results