EnhancerDB
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  3. vista17048[chr13:111044675-111045176]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17048[chr13:111044675-111045176]
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Tissue distribution of vista17048
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Transcription factor that possibly regulate vista17048[chr13:111044675-111045176]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111044986 111045129 GATA2 UCSC Txn Factor no Conserved 108089336
chr13 111044672 111044686 PAX6 JASPAR yes 19342850
chr13 111044672 111044686 PAX6 JASPAR yes 60346870
chr13 111044698 111044710 FOXI1 JASPAR yes 19342851
chr13 111044698 111044710 FOXI1 JASPAR yes 60346871
chr13 111044701 111044705 YY1 TRANSFAC yes 19342852
chr13 111044701 111044705 YY1 TRANSFAC yes 60346872
chr13 111044714 111044735 ZNF263 JASPAR yes 19342853
chr13 111044714 111044735 ZNF263 JASPAR yes 60346873
chr13 111044728 111044733 SP1 TRANSFAC yes 19342854
chr13 111044728 111044733 SP1 TRANSFAC yes 60346874
chr13 111044740 111044753 ELF1 JASPAR yes 19342855
chr13 111044740 111044753 ELF1 JASPAR yes 60346875
chr13 111044743 111044749 PEA3 TRANSFAC yes 19342856
chr13 111044743 111044749 PEA3 TRANSFAC yes 60346876
chr13 111044793 111044806 TFAP2A JASPAR yes 19342857
chr13 111044793 111044806 TFAP2B JASPAR yes 19342858
chr13 111044793 111044806 TFAP2C JASPAR yes 19342859
chr13 111044793 111044806 TFAP2A JASPAR yes 60346877
chr13 111044793 111044806 TFAP2B JASPAR yes 60346878
chr13 111044793 111044806 TFAP2C JASPAR yes 60346879
chr13 111044800 111044817 RXRA JASPAR yes 19342860
chr13 111044800 111044817 RXRA JASPAR yes 60346880
chr13 111044800 111044821 ZNF263 JASPAR yes 19342861
chr13 111044800 111044821 ZNF263 JASPAR yes 60346881
chr13 111044801 111044805 LFA1 TRANSFAC yes 19342862
chr13 111044801 111044805 LFA1 TRANSFAC yes 60346882
chr13 111044806 111044816 SP1 JASPAR yes 19342863
chr13 111044806 111044816 SP1 JASPAR yes 60346883
chr13 111044810 111044828 RARA JASPAR yes 19342864
chr13 111044810 111044828 RARA JASPAR yes 60346884
chr13 111044820 111044824 ESR1 TRANSFAC yes 19342865
chr13 111044820 111044824 ESR1 TRANSFAC yes 60346885
chr13 111044845 111044856 NFKB1 JASPAR yes 19342866
chr13 111044845 111044856 NFKB1 JASPAR yes 60346886
chr13 111044848 111044859 ELK4 JASPAR yes 19342867
chr13 111044848 111044859 ELK4 JASPAR yes 60346887
chr13 111044849 111044859 ELK1 JASPAR yes 19342868
chr13 111044849 111044859 GABPA JASPAR yes 19342869
chr13 111044849 111044859 ELK1 JASPAR yes 60346888
chr13 111044849 111044859 GABPA JASPAR yes 60346889
chr13 111044849 111044862 ELF1 JASPAR yes 19342870
chr13 111044849 111044862 ELF1 JASPAR yes 60346890
chr13 111044851 111044857 ETS1 JASPAR yes 19342871
chr13 111044851 111044857 SPI1 JASPAR yes 19342872
chr13 111044851 111044857 ETS1 JASPAR yes 60346891
chr13 111044851 111044857 SPI1 JASPAR yes 60346892
chr13 111044851 111044861 ELK1 JASPAR yes 19342873
chr13 111044851 111044861 ELK1 JASPAR yes 60346893
chr13 111044887 111044907 TP53 JASPAR yes 19342874
chr13 111044887 111044907 TP53 JASPAR yes 60346894
chr13 111044903 111044912 SRY JASPAR yes 19342875
chr13 111044903 111044912 SRY JASPAR yes 60346895
chr13 111044932 111044942 NEUROG2 JASPAR yes 19342876
chr13 111044932 111044942 NEUROG2 JASPAR yes 60346896
chr13 111044932 111044944 TAL1 JASPAR yes 19342877
chr13 111044932 111044944 TAL1 JASPAR yes 60346897
chr13 111044944 111044956 INSM1 JASPAR yes 19342878
chr13 111044944 111044956 INSM1 JASPAR yes 60346898
chr13 111044963 111044979 SRF JASPAR yes 19342879
chr13 111044963 111044979 SRF JASPAR yes 60346899
chr13 111044983 111044987 NFE TRANSFAC yes 19342880
chr13 111044983 111044987 NFE TRANSFAC yes 60346900
chr13 111044995 111045006 FOXA1 JASPAR yes 19342881
chr13 111044995 111045006 FOXA1 JASPAR yes 60346901
chr13 111044995 111045010 TFAP2C JASPAR yes 19342882
chr13 111044995 111045010 TFAP2C JASPAR yes 60346902
chr13 111044997 111045011 EBF1 JASPAR yes 19342883
chr13 111044997 111045011 EBF1 JASPAR yes 60346903
chr13 111045000 111045011 EBF1 JASPAR yes 19342884
chr13 111045000 111045011 EBF1 JASPAR yes 60346904
chr13 111045003 111045023 TP53 JASPAR yes 19342885
chr13 111045003 111045023 TP53 JASPAR yes 60346905
chr13 111045047 111045055 GATA3 JASPAR yes 19342886
chr13 111045047 111045055 GATA5 JASPAR yes 19342887
chr13 111045047 111045055 GATA3 JASPAR yes 60346906
chr13 111045047 111045055 GATA5 JASPAR yes 60346907
chr13 111045054 111045057 MYB TRANSFAC yes 19342888
chr13 111045054 111045057 MYB TRANSFAC yes 60346908
chr13 111045055 111045066 RUNX1 JASPAR yes 19342889
chr13 111045055 111045066 RUNX1 JASPAR yes 60346909
chr13 111045061 111045065 ESR1 TRANSFAC yes 19342890
chr13 111045061 111045065 ESR1 TRANSFAC yes 60346910
chr13 111045080 111045091 ELK4 JASPAR yes 19342891
chr13 111045080 111045091 FLI1 JASPAR yes 19342892
chr13 111045080 111045091 ELK4 JASPAR yes 60346911
chr13 111045080 111045091 FLI1 JASPAR yes 60346912
chr13 111045080 111045093 ELF3 JASPAR yes 19342893
chr13 111045080 111045093 ELF3 JASPAR yes 60346913
chr13 111045081 111045085 YY1 TRANSFAC yes 19342894
chr13 111045081 111045085 YY1 TRANSFAC yes 60346914
chr13 111045081 111045092 ELF5 JASPAR yes 19342895
chr13 111045081 111045092 ELF5 JASPAR yes 60346915
chr13 111045081 111045094 ELF1 JASPAR yes 19342896
chr13 111045081 111045094 ELF1 JASPAR yes 60346916
chr13 111045082 111045090 FEV JASPAR yes 19342897
chr13 111045082 111045090 FEV JASPAR yes 60346917
chr13 111045096 111045108 TAL1 JASPAR yes 19342898
chr13 111045096 111045108 TAL1 JASPAR yes 60346918
chr13 111045098 111045108 OLIG1 JASPAR yes 19342899
chr13 111045098 111045108 OLIG3 JASPAR yes 19342900
chr13 111045098 111045108 OLIG1 JASPAR yes 60346919
chr13 111045098 111045108 OLIG3 JASPAR yes 60346920
chr13 111045098 111045110 TAL1 JASPAR yes 19342901
chr13 111045098 111045110 TAL1 JASPAR yes 60346921
chr13 111045117 111045132 NR2C2 JASPAR yes 19342902
chr13 111045117 111045132 NR2C2 JASPAR yes 60346922
chr13 111045118 111045139 ZNF263 JASPAR yes 19342903
chr13 111045118 111045139 ZNF263 JASPAR yes 60346923
chr13 111045121 111045142 ZNF263 JASPAR yes 19342904
chr13 111045121 111045142 ZNF263 JASPAR yes 60346924
chr13 111045123 111045127 NFE TRANSFAC yes 19342905
chr13 111045123 111045127 NFE TRANSFAC yes 60346925
chr13 111045124 111045129 GATA2 JASPAR yes 19342906
chr13 111045124 111045129 GATA2 JASPAR yes 60346926
chr13 111045126 111045137 E2F6 JASPAR yes 19342907
chr13 111045126 111045137 E2F6 JASPAR yes 60346927
chr13 111045129 111045143 SPIC JASPAR yes 19342908
chr13 111045129 111045143 SPIC JASPAR yes 60346928
chr13 111045140 111045143 MYB TRANSFAC yes 19342909
chr13 111045140 111045143 MYB TRANSFAC yes 60346929
chr13 111045142 111045154 MEF2B JASPAR yes 19342910
chr13 111045142 111045154 MEF2B JASPAR yes 60346930
chr13 111045144 111045148 TEAD2 TRANSFAC yes 19342911
chr13 111045144 111045148 TEAD2 TRANSFAC yes 60346931
chr13 111045144 111045149 TBP TRANSFAC yes 19342912
chr13 111045144 111045149 TBP TRANSFAC yes 60346932
chr13 111045144 111045150 TMF TRANSFAC yes 19342913
chr13 111045144 111045150 TMF TRANSFAC yes 60346933
chr13 111045159 111045173 SPI1 JASPAR yes 19342914
chr13 111045159 111045173 SPI1 JASPAR yes 60346934
SNP sites on vista17048[chr13:111044675-111045176]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111044689 rs181479897 G A no 3394110
chr13 111044768 rs185623495 G A,T no 3394111
chr13 111044799 rs77851462 C G
TFAP2A TFAP2B TFAP2C
3394112
chr13 111044845 rs78294670 C T
NFKB1
3394113
chr13 111044932 rs371354421 C A
NEUROG2 TAL1
3394114
chr13 111045045 rs375669440 G A,T
GATA2
3394115
chr13 111045068 rs536783164 G T
GATA2
3394116
chr13 111045143 rs540895959 A T
MEF2B MYB SPIC
3394117
chr13 111045159 rs7995992 T G
SPI1
3394118
Genes possibly regulated by vista17048[chr13:111044675-111045176]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 110801318 110959496 - COL4A1 ENSG00000187498.10 110959496 0.85 0.93 13019 14821
chr13 110958159 111165374 + COL4A2 ENSG00000134871.13 110958159 0.78 0.91 13020 13484
Expression level of Genes
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miRNAs possibly regulated by vista17048[chr13:111044675-111045176]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results