EnhancerDB
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  3. rs540895959[chr13:111045143]
Enhancers that have rs540895959[chr13:111045143]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 111037685 111076655 enh15498
Brain (SK-N-MC) Liver Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr13 111044675 111045176 vista17048
VISTA
Transcript factors that have rs540895959[chr13:111045143]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 111044868 111045312 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21605207
chr13 111044868 111045312 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108089335
chr13 111045123 111045445 TCF7L2 GTRD no Colon (HCT116) 108089337
chr13 111045129 111045143 SPIC JASPAR yes 19342908
chr13 111045129 111045143 SPIC JASPAR yes 60346928
chr13 111045140 111045143 MYB TRANSFAC yes 19342909
chr13 111045140 111045143 MYB TRANSFAC yes 60346929
chr13 111045142 111045154 MEF2B JASPAR yes 19342910
chr13 111045142 111045154 MEF2B JASPAR yes 60346930
Genes associated with rs540895959[chr13:111045143], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More