EnhancerDB
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  3. vista17059[chr13:111124207-111124408]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17059[chr13:111124207-111124408]
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Tissue distribution of vista17059
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Transcription factor that possibly regulate vista17059[chr13:111124207-111124408]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111124097 111124552 NFIC UCSC Txn Factor no Conserved 108089638
chr13 111124122 111124521 RUNX3 UCSC Txn Factor no Conserved 108089646
chr13 111124128 111124484 EP300 UCSC Txn Factor no Conserved 108089651
chr13 111124129 111124459 BHLHE40 UCSC Txn Factor no Conserved 108089652
chr13 111124131 111124532 ATF2 UCSC Txn Factor no Conserved 108089654
chr13 111124135 111124522 FOXM1 UCSC Txn Factor no Conserved 108089658
chr13 111124166 111124512 TCF12 UCSC Txn Factor no Conserved 108089668
chr13 111124167 111124471 PAX5 UCSC Txn Factor no Conserved 108089670
chr13 111124173 111124350 EGR1 UCSC Txn Factor no Conserved 108089672
chr13 111124174 111124470 BCL11A UCSC Txn Factor no Conserved 108089674
chr13 111124175 111124529 NFATC1 UCSC Txn Factor no Conserved 108089676
chr13 111124183 111124491 SPI1 UCSC Txn Factor no Conserved 108089681
chr13 111124206 111124475 JUND UCSC Txn Factor no Conserved 108089691
chr13 111124204 111124215 USF2 JASPAR yes 19343395
chr13 111124204 111124215 USF2 JASPAR yes 60353057
chr13 111124207 111124212 USF2 TRANSFAC yes 19343396
chr13 111124207 111124212 USF2 TRANSFAC yes 60353058
chr13 111124246 111124261 ZIC3 JASPAR yes 19343397
chr13 111124246 111124261 ZIC4 JASPAR yes 19343398
chr13 111124246 111124261 ZIC3 JASPAR yes 60353059
chr13 111124246 111124261 ZIC4 JASPAR yes 60353060
chr13 111124246 111124266 RREB1 JASPAR yes 19343399
chr13 111124246 111124266 RREB1 JASPAR yes 60353061
chr13 111124247 111124261 ZIC1 JASPAR yes 19343400
chr13 111124247 111124261 ZIC1 JASPAR yes 60353062
chr13 111124254 111124271 ESR1 JASPAR yes 19343401
chr13 111124254 111124271 ESR1 JASPAR yes 60353063
chr13 111124254 111124272 ESR1 JASPAR yes 19343402
chr13 111124254 111124272 ESR1 JASPAR yes 60353064
chr13 111124255 111124270 ESR2 JASPAR yes 19343403
chr13 111124255 111124270 ESR2 JASPAR yes 60353065
chr13 111124263 111124271 NR4A2 JASPAR yes 19343404
chr13 111124263 111124271 NR4A2 JASPAR yes 60353066
chr13 111124264 111124272 CREB1 JASPAR yes 19343405
chr13 111124264 111124272 CREB1 JASPAR yes 60353067
chr13 111124264 111124278 NR2F1 JASPAR yes 19343406
chr13 111124264 111124278 NR2F1 JASPAR yes 60353068
chr13 111124279 111124284 ETS2 TRANSFAC yes 19343407
chr13 111124279 111124284 ETS2 TRANSFAC yes 60353069
chr13 111124296 111124309 SMAD2 JASPAR yes 19343408
chr13 111124296 111124309 SMAD2 JASPAR yes 60353070
chr13 111124300 111124304 NFE TRANSFAC yes 19343409
chr13 111124300 111124304 NFE TRANSFAC yes 60353071
chr13 111124301 111124313 PKNOX1 JASPAR yes 19343410
chr13 111124301 111124313 PKNOX1 JASPAR yes 60353072
chr13 111124302 111124312 TFAP4 JASPAR yes 19343411
chr13 111124302 111124312 TFAP4 JASPAR yes 60353073
chr13 111124314 111124331 RARA JASPAR yes 19343412
chr13 111124314 111124331 RXRA JASPAR yes 19343413
chr13 111124314 111124331 RARA JASPAR yes 60353074
chr13 111124314 111124331 RXRA JASPAR yes 60353075
chr13 111124319 111124332 JUN JASPAR yes 19343414
chr13 111124319 111124332 JUN JASPAR yes 60353076
chr13 111124329 111124344 TP53 JASPAR yes 19343415
chr13 111124329 111124344 TP53 JASPAR yes 60353077
chr13 111124332 111124351 PAX5 JASPAR yes 19343416
chr13 111124332 111124351 PAX5 JASPAR yes 60353078
chr13 111124345 111124366 IRF1 JASPAR yes 19343417
chr13 111124345 111124366 IRF1 JASPAR yes 60353079
chr13 111124348 111124362 IRF8 JASPAR yes 19343418
chr13 111124348 111124362 IRF8 JASPAR yes 60353080
chr13 111124349 111124363 SPI1 JASPAR yes 19343419
chr13 111124349 111124363 SPIC JASPAR yes 19343420
chr13 111124349 111124363 SPI1 JASPAR yes 60353081
chr13 111124349 111124363 SPIC JASPAR yes 60353082
chr13 111124349 111124364 STAT2 JASPAR yes 19343421
chr13 111124349 111124364 STAT2 JASPAR yes 60353083
chr13 111124350 111124363 ELF1 JASPAR yes 19343422
chr13 111124350 111124363 ELF1 JASPAR yes 60353084
chr13 111124351 111124363 EHF JASPAR yes 19343423
chr13 111124351 111124363 EHF JASPAR yes 60353085
chr13 111124351 111124364 ELF3 JASPAR yes 19343424
chr13 111124351 111124364 ELF3 JASPAR yes 60353086
chr13 111124352 111124363 ELF5 JASPAR yes 19343425
chr13 111124352 111124363 ELF5 JASPAR yes 60353087
chr13 111124353 111124363 GABPA JASPAR yes 19343426
chr13 111124353 111124363 GABPA JASPAR yes 60353088
chr13 111124353 111124364 FLI1 JASPAR yes 19343427
chr13 111124353 111124364 FLI1 JASPAR yes 60353089
chr13 111124354 111124359 ETS2 TRANSFAC yes 19343428
chr13 111124354 111124359 ETS2 TRANSFAC yes 60353090
chr13 111124354 111124362 FEV JASPAR yes 19343429
chr13 111124354 111124362 FEV JASPAR yes 60353091
chr13 111124355 111124362 SPI1 JASPAR yes 19343430
chr13 111124355 111124362 SPI1 JASPAR yes 60353092
chr13 111124364 111124379 JUND JASPAR yes 19343431
chr13 111124364 111124379 JUND JASPAR yes 60353093
chr13 111124365 111124378 DUXA JASPAR yes 19343432
chr13 111124365 111124378 DUXA JASPAR yes 60353094
chr13 111124366 111124377 DUX4 JASPAR yes 19343433
chr13 111124366 111124377 DUX4 JASPAR yes 60353095
chr13 111124367 111124382 JUND JASPAR yes 19343434
chr13 111124367 111124382 JUND JASPAR yes 60353096
chr13 111124368 111124381 JUN JASPAR yes 19343435
chr13 111124368 111124381 JUN JASPAR yes 60353097
chr13 111124375 111124379 YY1 TRANSFAC yes 19343436
chr13 111124375 111124379 YY1 TRANSFAC yes 60353098
chr13 111124380 111124385 GATA2 JASPAR yes 19343437
chr13 111124380 111124385 GATA2 JASPAR yes 60353099
chr13 111124381 111124388 POU2F1 TRANSFAC yes 19343438
chr13 111124381 111124388 POU2F1 TRANSFAC yes 60353100
chr13 111124407 111124419 PKNOX1 JASPAR yes 19343439
chr13 111124407 111124419 PKNOX2 JASPAR yes 19343440
chr13 111124407 111124419 PKNOX1 JASPAR yes 60353101
chr13 111124407 111124419 PKNOX2 JASPAR yes 60353102
chr13 111124408 111124418 MSC JASPAR yes 19343441
chr13 111124408 111124418 MYF6 JASPAR yes 19343442
chr13 111124408 111124418 MSC JASPAR yes 60353103
chr13 111124408 111124418 MYF6 JASPAR yes 60353104
SNP sites on vista17059[chr13:111124207-111124408]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111124255 rs4284503 G A
ATF2 BCL11A BHLHE40 EGR1 EP300 ESR1 ESR2 FOXM1 JUND NFATC1 NFIC PAX5 RREB1 RUNX3 SPI1 TCF12 ZIC1 ZIC3 ZIC4
3395008
chr13 111124276 rs74836716 G A
ATF2 BCL11A BHLHE40 EGR1 EP300 FOXM1 JUND NFATC1 NFIC NR2F1 PAX5 RUNX3 SPI1 TCF12
3395009
chr13 111124323 rs571631881 C A
ATF2 BCL11A BHLHE40 EGR1 EP300 FOXM1 JUN JUND NFATC1 NFIC PAX5 RARA RUNX3 RXRA SPI1 TCF12
3395010
Genes possibly regulated by vista17059[chr13:111124207-111124408]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 111175417 111214080 - RAB20 ENSG00000139832.3 111214080 0.75 1.0 13021 10328
Expression level of Genes
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miRNAs possibly regulated by vista17059[chr13:111124207-111124408]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results