EnhancerDB
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  3. vista17120[chr13:113421890-113422034]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17120[chr13:113421890-113422034]
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Tissue distribution of vista17120
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Transcription factor that possibly regulate vista17120[chr13:113421890-113422034]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 113422025 113422383 RUNX3 UCSC Txn Factor no Conserved 108090545
chr13 113421880 113421894 TLX1 JASPAR yes 19346166
chr13 113421880 113421894 TLX1 JASPAR yes 60435988
chr13 113421887 113421902 RFX5 JASPAR yes 19346167
chr13 113421887 113421902 RFX5 JASPAR yes 60435990
chr13 113421891 113421906 RUNX2 JASPAR yes 19346168
chr13 113421891 113421906 RUNX2 JASPAR yes 60435991
chr13 113421892 113421895 MYB TRANSFAC yes 19346169
chr13 113421892 113421895 MYB TRANSFAC yes 60435992
chr13 113421892 113421901 RUNX2 JASPAR yes 19346170
chr13 113421892 113421901 RUNX2 JASPAR yes 60435993
chr13 113421892 113421902 RUNX3 JASPAR yes 19346171
chr13 113421892 113421902 RUNX3 JASPAR yes 60435994
chr13 113421892 113421903 RUNX1 JASPAR yes 19346172
chr13 113421892 113421903 RUNX1 JASPAR yes 60435995
chr13 113421912 113421916 NFE TRANSFAC yes 19346173
chr13 113421912 113421916 NFE TRANSFAC yes 60435996
chr13 113421929 113421939 HESX1 JASPAR yes 19346174
chr13 113421929 113421939 HESX1 JASPAR yes 60435997
chr13 113421930 113421938 DLX6 JASPAR yes 19346175
chr13 113421930 113421938 MSX2 JASPAR yes 19346176
chr13 113421930 113421938 DLX6 JASPAR yes 60435998
chr13 113421930 113421938 MSX2 JASPAR yes 60435999
chr13 113421978 113421990 TEAD1 JASPAR yes 19346177
chr13 113421978 113421990 TEAD1 JASPAR yes 60436000
chr13 113422001 113422012 HOXA10 JASPAR yes 19346178
chr13 113422001 113422012 HOXA10 JASPAR yes 60436001
chr13 113422002 113422011 CDX1 JASPAR yes 19346179
chr13 113422002 113422011 CDX1 JASPAR yes 60436002
chr13 113422002 113422012 HOXA13 JASPAR yes 19346180
chr13 113422002 113422012 HOXB13 JASPAR yes 19346181
chr13 113422002 113422012 HOXD13 JASPAR yes 19346182
chr13 113422002 113422012 HOXA13 JASPAR yes 60436003
chr13 113422002 113422012 HOXB13 JASPAR yes 60436004
chr13 113422002 113422012 HOXD13 JASPAR yes 60436005
chr13 113422022 113422037 PRDM1 JASPAR yes 19346183
chr13 113422022 113422037 PRDM1 JASPAR yes 60436006
chr13 113422028 113422034 MZF1 JASPAR yes 19346184
chr13 113422028 113422034 MZF1 JASPAR yes 60436007
chr13 113422032 113422047 NFYB JASPAR yes 19346185
chr13 113422032 113422047 NFYB JASPAR yes 60436008
chr13 113422034 113422050 NFYA JASPAR yes 19346186
chr13 113422034 113422050 NFYA JASPAR yes 60436009
SNP sites on vista17120[chr13:113421890-113422034]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 113421953 rs367403 G A no 3406607
chr13 113421963 rs112314987 T TTTCTC no 3406608
chr13 113421963 rs186816718 T C no 3406609
chr13 113421963 rs79101037 T TTTCTC no 3406610
chr13 113422004 rs421851 C T
CDX1 HOXA10 HOXA13 HOXB13 HOXD13
3406611
chr13 113422034 rs55784920 A G
MZF1 NFYA NFYB PRDM1 RUNX3
3406612
Genes possibly regulated by vista17120[chr13:113421890-113422034]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 113344643 113541482 + ATP11A ENSG00000068650.14 113344643 0.92 1.0 13034 22753
Expression level of Genes
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miRNAs possibly regulated by vista17120[chr13:113421890-113422034]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results