-
Home
- SNP
- rs55784920[chr13:113422034]
Enhancers that have rs55784920[chr13:113422034]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr13 |
113418945 |
113428944 |
enh64758 |
|
|
| chr13 |
113421890 |
113422034 |
vista17120 |
|
|
Transcript factors that have rs55784920[chr13:113422034]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr13
|
113420419
|
113422264
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108090539
|
|
|
chr13
|
113421231
|
113422168
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108090542
|
|
|
chr13
|
113421938
|
113422534
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108090543
|
|
|
chr13
|
113421959
|
113422283
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108090544
|
|
|
chr13
|
113422022
|
113422037
|
PRDM1
|
JASPAR
|
yes
|
|
19346183
|
|
|
chr13
|
113422022
|
113422037
|
PRDM1
|
JASPAR
|
yes
|
|
60436006
|
|
|
chr13
|
113422025
|
113422383
|
RUNX3
|
UCSC Txn Factor
|
no
|
Conserved
|
108090545
|
|
|
chr13
|
113422025
|
113422383
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108090546
|
|
|
chr13
|
113422028
|
113422034
|
MZF1
|
JASPAR
|
yes
|
|
19346184
|
|
|
chr13
|
113422028
|
113422034
|
MZF1
|
JASPAR
|
yes
|
|
60436007
|
|
|
chr13
|
113422029
|
113422359
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108090547
|
|
|
chr13
|
113422032
|
113422047
|
NFYB
|
JASPAR
|
yes
|
|
19346185
|
|
|
chr13
|
113422032
|
113422047
|
NFYB
|
JASPAR
|
yes
|
|
60436008
|
|
|
chr13
|
113422034
|
113422050
|
NFYA
|
JASPAR
|
yes
|
|
19346186
|
|
|
chr13
|
113422034
|
113422050
|
NFYA
|
JASPAR
|
yes
|
|
60436009
|
|
Genes associated with rs55784920[chr13:113422034], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |