EnhancerDB
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  3. vista17138[chr13:113685939-113686263]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17138[chr13:113685939-113686263]
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Tissue distribution of vista17138
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Transcription factor that possibly regulate vista17138[chr13:113685939-113686263]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 113685947 113685968 ZNF263 JASPAR yes 19346885
chr13 113685958 113685969 TBX20 JASPAR yes 19346886
chr13 113685959 113685967 TBX15 JASPAR yes 19346887
chr13 113685959 113685970 E2F6 JASPAR yes 19346888
chr13 113685960 113685965 SP1 TRANSFAC yes 19346889
chr13 113685963 113685968 ETS2 TRANSFAC yes 19346890
chr13 113685972 113685987 HSF1 JASPAR yes 19346891
chr13 113685982 113686003 ZNF263 JASPAR yes 19346892
chr13 113685997 113686002 ETS2 TRANSFAC yes 19346893
chr13 113686015 113686027 CREB1 JASPAR yes 19346894
chr13 113686026 113686045 REST JASPAR yes 19346895
chr13 113686028 113686038 NFATC3 JASPAR yes 19346896
chr13 113686059 113686073 GLIS3 JASPAR yes 19346897
chr13 113686091 113686111 TP63 JASPAR yes 19346898
chr13 113686093 113686108 TP53 JASPAR yes 19346899
chr13 113686098 113686113 NR2C2 JASPAR yes 19346900
chr13 113686099 113686113 RXRG JASPAR yes 19346901
chr13 113686101 113686113 PKNOX1 JASPAR yes 19346902
chr13 113686101 113686113 TGIF2 JASPAR yes 19346903
chr13 113686104 113686117 NR2F1 JASPAR yes 19346904
chr13 113686107 113686124 RXRA JASPAR yes 19346905
chr13 113686108 113686112 ESR1 TRANSFAC yes 19346906
chr13 113686115 113686125 SREBF2 JASPAR yes 19346907
chr13 113686116 113686134 SRF JASPAR yes 19346908
chr13 113686162 113686182 TP63 JASPAR yes 19346909
chr13 113686163 113686181 TP53 JASPAR yes 19346910
chr13 113686163 113686181 TP73 JASPAR yes 19346911
chr13 113686165 113686180 TP53 JASPAR yes 19346912
chr13 113686170 113686182 HES7 JASPAR yes 19346913
chr13 113686175 113686190 RUNX2 JASPAR yes 19346914
chr13 113686178 113686198 RREB1 JASPAR yes 19346915
chr13 113686180 113686200 RREB1 JASPAR yes 19346916
chr13 113686182 113686202 RREB1 JASPAR yes 19346917
chr13 113686184 113686204 RREB1 JASPAR yes 19346918
chr13 113686186 113686206 RREB1 JASPAR yes 19346919
chr13 113686225 113686245 TP63 JASPAR yes 19346920
chr13 113686240 113686253 ZBTB18 JASPAR yes 19346921
chr13 113686258 113686262 TEAD2 TRANSFAC yes 19346922
SNP sites on vista17138[chr13:113685939-113686263]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 113685941 rs552459061 G A no 3408553
chr13 113685958 rs116296382 C T
TBX20 ZNF263
3408554
chr13 113686025 rs3011510 G A
CREB1
3408555
chr13 113686036 rs571948518 ATGGGCCTGGCTCAAAGCTCC A
NFATC3 REST
3408556
chr13 113686037 rs188729425 T C
NFATC3 REST
3408557
chr13 113686058 rs565348016 A G no 3408558
chr13 113686161 rs138501782 C A no 3408559
chr13 113686176 rs537735251 C T
HES7 RUNX2 TP53 TP63 TP73
3408560
chr13 113686180 rs541379814 CCA C
HES7 RREB1 RUNX2 TP53 TP63 TP73
3408561
chr13 113686180 rs56360016 CCA C
HES7 RREB1 RUNX2 TP53 TP63 TP73
3408562
chr13 113686180 rs66489324 CCA C
HES7 RREB1 RUNX2 TP53 TP63 TP73
3408563
chr13 113686180 rs751175095 CCA C
HES7 RREB1 RUNX2 TP53 TP63 TP73
3408564
chr13 113686180 rs796776296 CCA C
HES7 RREB1 RUNX2 TP53 TP63 TP73
3408565
chr13 113686209 rs3011509 C T no 3408566
chr13 113686211 rs181531945 C T no 3408567
chr13 113686253 rs190335410 C G
ZBTB18
3408568
chr13 113686263 rs112601218 A G no 3408569
Genes possibly regulated by vista17138[chr13:113685939-113686263]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 113755563 113756608 - AL137002.1 ENSG00000268130.1 113756608 0.0 0.0 13036 29655
chr13 113760105 113774995 + F7 ENSG00000057593.9 113760105 1.0 1.0 13037 26158
chr13 113777128 113803843 + F10 ENSG00000126218.7 113777128 0.95 1.0 13038 9135
Expression level of Genes
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miRNAs possibly regulated by vista17138[chr13:113685939-113686263]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results