EnhancerDB
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  3. vista19669[chr15:39627132-39627473]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19669[chr15:39627132-39627473]
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Tissue distribution of vista19669
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Transcription factor that possibly regulate vista19669[chr15:39627132-39627473]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 39627156 39627161 GATA2 JASPAR yes 22877832
chr15 39627156 39627161 GATA2 JASPAR yes 70508853
chr15 39627162 39627177 ESR2 JASPAR yes 22877833
chr15 39627162 39627177 ESR2 JASPAR yes 70508854
chr15 39627162 39627182 ESR1 JASPAR yes 22877834
chr15 39627162 39627182 ESR1 JASPAR yes 70508855
chr15 39627163 39627167 ESR1 TRANSFAC yes 22877835
chr15 39627163 39627167 ESR1 TRANSFAC yes 70508856
chr15 39627183 39627187 H4TF2 TRANSFAC yes 22877836
chr15 39627183 39627187 H4TF2 TRANSFAC yes 70508857
chr15 39627195 39627207 PROX1 JASPAR yes 22877837
chr15 39627195 39627207 PROX1 JASPAR yes 70508858
chr15 39627224 39627228 YY1 TRANSFAC yes 22877838
chr15 39627224 39627228 YY1 TRANSFAC yes 70508859
chr15 39627227 39627241 XBP1 JASPAR yes 22877839
chr15 39627227 39627241 XBP1 JASPAR yes 70508860
chr15 39627228 39627234 MZF1 JASPAR yes 22877840
chr15 39627228 39627234 MZF1 JASPAR yes 70508861
chr15 39627233 39627238 ATF1 TRANSFAC yes 22877841
chr15 39627233 39627238 ATF1 TRANSFAC yes 70508862
chr15 39627251 39627254 MYB TRANSFAC yes 22877842
chr15 39627251 39627254 MYB TRANSFAC yes 70508863
chr15 39627279 39627297 NR3C1 JASPAR yes 22877843
chr15 39627279 39627297 NR3C1 JASPAR yes 70508864
chr15 39627281 39627287 PEA3 TRANSFAC yes 22877844
chr15 39627281 39627287 PEA3 TRANSFAC yes 70508865
chr15 39627290 39627302 TAL1 JASPAR yes 22877845
chr15 39627290 39627302 TAL1 JASPAR yes 70508866
chr15 39627292 39627302 NEUROG2 JASPAR yes 22877846
chr15 39627292 39627302 OLIG1 JASPAR yes 22877847
chr15 39627292 39627302 OLIG3 JASPAR yes 22877848
chr15 39627292 39627302 NEUROG2 JASPAR yes 70508867
chr15 39627292 39627302 OLIG1 JASPAR yes 70508868
chr15 39627292 39627302 OLIG3 JASPAR yes 70508869
chr15 39627292 39627304 TAL1 JASPAR yes 22877849
chr15 39627292 39627304 TAL1 JASPAR yes 70508870
chr15 39627357 39627372 MAFK JASPAR yes 22877850
chr15 39627357 39627372 MAFK JASPAR yes 70508871
chr15 39627358 39627369 CEBPB JASPAR yes 22877851
chr15 39627358 39627369 CEBPB JASPAR yes 70508872
chr15 39627358 39627371 ATF4 JASPAR yes 22877852
chr15 39627358 39627371 ATF4 JASPAR yes 70508873
chr15 39627359 39627372 JUN JASPAR yes 22877853
chr15 39627359 39627372 JUN JASPAR yes 70508874
chr15 39627369 39627384 HNF4G JASPAR yes 22877854
chr15 39627369 39627384 HNF4G JASPAR yes 70508875
chr15 39627370 39627384 NR2F1 JASPAR yes 22877855
chr15 39627370 39627384 NR2F1 JASPAR yes 70508876
chr15 39627370 39627385 HNF4A JASPAR yes 22877856
chr15 39627370 39627385 HNF4A JASPAR yes 70508877
chr15 39627373 39627379 TCF4 TRANSFAC yes 22877857
chr15 39627373 39627379 TCF4 TRANSFAC yes 70508878
chr15 39627380 39627385 ETS2 TRANSFAC yes 22877858
chr15 39627380 39627385 ETS2 TRANSFAC yes 70508879
chr15 39627397 39627408 E2F1 JASPAR yes 22877859
chr15 39627397 39627408 E2F1 JASPAR yes 70508880
chr15 39627404 39627425 ZNF263 JASPAR yes 22877860
chr15 39627404 39627425 ZNF263 JASPAR yes 70508881
chr15 39627407 39627428 ZNF263 JASPAR yes 22877861
chr15 39627407 39627428 ZNF263 JASPAR yes 70508882
chr15 39627431 39627452 ZNF263 JASPAR yes 22877862
chr15 39627431 39627452 ZNF263 JASPAR yes 70508883
chr15 39627442 39627450 TBX15 JASPAR yes 22877863
chr15 39627442 39627450 TBX15 JASPAR yes 70508884
chr15 39627453 39627465 HES7 JASPAR yes 22877864
chr15 39627453 39627465 PKNOX2 JASPAR yes 22877865
chr15 39627453 39627465 HES7 JASPAR yes 70508885
chr15 39627453 39627465 PKNOX2 JASPAR yes 70508886
chr15 39627455 39627464 SNAI2 JASPAR yes 22877866
chr15 39627455 39627464 SNAI2 JASPAR yes 70508887
chr15 39627456 39627461 USF2 TRANSFAC yes 22877867
chr15 39627456 39627461 USF2 TRANSFAC yes 70508888
chr15 39627461 39627467 YY1 JASPAR yes 22877868
chr15 39627461 39627467 YY1 JASPAR yes 70508889
chr15 39627471 39627483 ZBTB7B JASPAR yes 22877869
chr15 39627471 39627483 ZBTB7B JASPAR yes 70508890
SNP sites on vista19669[chr15:39627132-39627473]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 39627146 rs10520128 G C no 3905069
chr15 39627235 rs113565280 C T
ATF1 XBP1
3905070
chr15 39627236 rs116510207 G A
ATF1 XBP1
3905071
chr15 39627294 rs143075776 C T
NEUROG2 NR3C1 OLIG1 OLIG3 TAL1
3905072
chr15 39627330 rs11070187 A C no 3905073
chr15 39627343 rs11070188 A G no 3905074
chr15 39627413 rs138739597 CCACCACTCTTCCTCATGGCCCCT C
ZNF263
3905075
chr15 39627413 rs377611952 CCACCACTCTTCCTCATGGCCCCT C
ZNF263
3905076
chr15 39627438 rs190454780 A C
ZNF263
3905077
chr15 39627455 rs115435342 G A
HES7 PKNOX2 SNAI2
3905078
Genes possibly regulated by vista19669[chr15:39627132-39627473]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 39542885 39547046 + C15orf54 ENSG00000175746.4 39542885 0.96 0.99 13794 15753
Expression level of Genes
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miRNAs possibly regulated by vista19669[chr15:39627132-39627473]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results