EnhancerDB
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  3. vista19850[chr15:45930863-45931040]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19850[chr15:45930863-45931040]
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Tissue distribution of vista19850
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Transcription factor that possibly regulate vista19850[chr15:45930863-45931040]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 45930858 45930872 TLX1 JASPAR yes 23143337
chr15 45930858 45930872 TLX1 JASPAR yes 70518248
chr15 45930886 45930898 TEAD1 JASPAR yes 23143338
chr15 45930886 45930898 TEAD1 JASPAR yes 70518249
chr15 45930897 45930916 PAX5 JASPAR yes 23143339
chr15 45930897 45930916 PAX5 JASPAR yes 70518250
chr15 45930917 45930921 NFE TRANSFAC yes 23143340
chr15 45930917 45930921 NFE TRANSFAC yes 70518251
chr15 45930919 45930934 MEF2C JASPAR yes 23143341
chr15 45930919 45930934 MEF2C JASPAR yes 70518252
chr15 45930920 45930941 IRF1 JASPAR yes 23143342
chr15 45930920 45930941 IRF1 JASPAR yes 70518253
chr15 45930924 45930938 SPIC JASPAR yes 23143343
chr15 45930924 45930938 STAT1 JASPAR yes 23143344
chr15 45930924 45930938 SPIC JASPAR yes 70518254
chr15 45930924 45930938 STAT1 JASPAR yes 70518255
chr15 45930924 45930939 PRDM1 JASPAR yes 23143345
chr15 45930924 45930939 STAT2 JASPAR yes 23143346
chr15 45930924 45930939 PRDM1 JASPAR yes 70518256
chr15 45930924 45930939 STAT2 JASPAR yes 70518257
chr15 45930924 45930945 IRF1 JASPAR yes 23143347
chr15 45930924 45930945 IRF1 JASPAR yes 70518258
chr15 45930926 45930947 IRF1 JASPAR yes 23143348
chr15 45930926 45930947 IRF1 JASPAR yes 70518259
chr15 45930928 45930949 IRF1 JASPAR yes 23143349
chr15 45930928 45930949 IRF1 JASPAR yes 70518260
chr15 45930930 45930951 IRF1 JASPAR yes 23143350
chr15 45930930 45930951 IRF1 JASPAR yes 70518261
chr15 45930934 45930949 FOXP1 JASPAR yes 23143351
chr15 45930934 45930949 FOXP1 JASPAR yes 70518262
chr15 45930934 45930955 IRF1 JASPAR yes 23143352
chr15 45930934 45930955 IRF1 JASPAR yes 70518263
chr15 45930935 45930950 FOXP1 JASPAR yes 23143353
chr15 45930935 45930950 FOXP1 JASPAR yes 70518264
chr15 45930935 45930956 IRF1 JASPAR yes 23143354
chr15 45930935 45930956 IRF1 JASPAR yes 70518265
chr15 45930936 45930951 FOXP1 JASPAR yes 23143355
chr15 45930936 45930951 FOXP1 JASPAR yes 70518266
chr15 45930936 45930957 IRF1 JASPAR yes 23143356
chr15 45930936 45930957 IRF1 JASPAR yes 70518267
chr15 45930937 45930952 FOXP1 JASPAR yes 23143357
chr15 45930937 45930952 FOXP1 JASPAR yes 70518268
chr15 45930937 45930958 IRF1 JASPAR yes 23143358
chr15 45930937 45930958 IRF1 JASPAR yes 70518269
chr15 45930938 45930953 FOXP1 JASPAR yes 23143359
chr15 45930938 45930953 FOXP1 JASPAR yes 70518270
chr15 45930942 45930963 IRF1 JASPAR yes 23143360
chr15 45930942 45930963 IRF1 JASPAR yes 70518271
chr15 45930943 45930964 IRF1 JASPAR yes 23143361
chr15 45930943 45930964 IRF1 JASPAR yes 70518272
chr15 45930946 45930960 STAT1 JASPAR yes 23143362
chr15 45930946 45930960 STAT1 JASPAR yes 70518273
chr15 45930946 45930961 PRDM1 JASPAR yes 23143363
chr15 45930946 45930961 STAT2 JASPAR yes 23143364
chr15 45930946 45930961 PRDM1 JASPAR yes 70518274
chr15 45930946 45930961 STAT2 JASPAR yes 70518275
chr15 45930947 45930962 PRDM1 JASPAR yes 23143365
chr15 45930947 45930962 PRDM1 JASPAR yes 70518276
chr15 45930950 45930955 ETS2 TRANSFAC yes 23143366
chr15 45930950 45930955 ETS2 TRANSFAC yes 70518277
chr15 45930955 45930966 PHOX2A JASPAR yes 23143367
chr15 45930955 45930966 PROP1 JASPAR yes 23143368
chr15 45930955 45930966 PHOX2A JASPAR yes 70518278
chr15 45930955 45930966 PROP1 JASPAR yes 70518279
chr15 45930958 45930972 RORA JASPAR yes 23143369
chr15 45930958 45930972 RORA JASPAR yes 70518280
chr15 45930965 45930975 POU6F2 JASPAR yes 23143370
chr15 45930965 45930975 POU6F2 JASPAR yes 70518281
chr15 45930966 45930970 ESR1 TRANSFAC yes 23143371
chr15 45930966 45930970 ESR1 TRANSFAC yes 70518282
chr15 45930966 45930976 EMX1 JASPAR yes 23143372
chr15 45930966 45930976 MEOX2 JASPAR yes 23143373
chr15 45930966 45930976 EMX1 JASPAR yes 70518283
chr15 45930966 45930976 MEOX2 JASPAR yes 70518284
chr15 45930967 45930975 NKX6-1 JASPAR yes 23143374
chr15 45930967 45930975 NKX6-1 JASPAR yes 70518285
chr15 45930969 45930973 YY1 TRANSFAC yes 23143375
chr15 45930969 45930973 YY1 TRANSFAC yes 70518286
chr15 45930983 45930992 PITX3 JASPAR yes 23143376
chr15 45930983 45930992 PITX3 JASPAR yes 70518287
chr15 45930983 45930993 GSC2 JASPAR yes 23143377
chr15 45930983 45930993 GSC JASPAR yes 23143378
chr15 45930983 45930993 GSC2 JASPAR yes 70518288
chr15 45930983 45930993 GSC JASPAR yes 70518289
chr15 45930984 45931000 POU4F2 JASPAR yes 23143379
chr15 45930984 45931000 POU4F3 JASPAR yes 23143380
chr15 45930984 45931000 POU4F2 JASPAR yes 70518290
chr15 45930984 45931000 POU4F3 JASPAR yes 70518291
chr15 45930985 45930996 PHOX2A JASPAR yes 23143381
chr15 45930985 45930996 PHOX2A JASPAR yes 70518292
chr15 45930989 45930993 H1TF2 TRANSFAC yes 23143382
chr15 45930989 45930993 NFE TRANSFAC yes 23143383
chr15 45930989 45930993 SRF TRANSFAC yes 23143384
chr15 45930989 45930993 H1TF2 TRANSFAC yes 70518293
chr15 45930989 45930993 NFE TRANSFAC yes 70518294
chr15 45930989 45930993 SRF TRANSFAC yes 70518295
chr15 45931002 45931007 GATA2 JASPAR yes 23143385
chr15 45931002 45931007 GATA2 JASPAR yes 70518296
chr15 45931002 45931020 SRF JASPAR yes 23143386
chr15 45931002 45931020 SRF JASPAR yes 70518297
chr15 45931003 45931015 SRF JASPAR yes 23143387
chr15 45931003 45931015 SRF JASPAR yes 70518298
chr15 45931008 45931012 TEAD2 TRANSFAC yes 23143388
chr15 45931008 45931012 TEAD2 TRANSFAC yes 70518299
chr15 45931016 45931027 NFE2 JASPAR yes 23143389
chr15 45931016 45931027 NFE2 JASPAR yes 70518300
chr15 45931016 45931030 XBP1 JASPAR yes 23143390
chr15 45931016 45931030 XBP1 JASPAR yes 70518301
chr15 45931029 45931039 MAX JASPAR yes 23143391
chr15 45931029 45931039 MAX JASPAR yes 70518302
chr15 45931033 45931043 MAX JASPAR yes 23143392
chr15 45931033 45931043 MAX JASPAR yes 70518303
SNP sites on vista19850[chr15:45930863-45931040]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 45930948 rs553476054 A G
FOXP1 IRF1 PRDM1 STAT1 STAT2
3932924
chr15 45930954 rs35948532 G A
ETS2 IRF1 PRDM1 STAT1 STAT2
3932925
chr15 45930977 rs190923550 G A no 3932926
Genes possibly regulated by vista19850[chr15:45930863-45931040]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 45879321 45908197 + BLOC1S6 ENSG00000104164.6 45879321 0.61 0.98 13908 48458
chr15 45879549 45968512 + RP11-96O20.4 ENSG00000260170.1 45879549 0.98 0.96 13909 48686
chr15 45923346 45983492 + SQRDL ENSG00000137767.9 45923346 0.7 0.99 13910 92483
Expression level of Genes
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miRNAs possibly regulated by vista19850[chr15:45930863-45931040]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results