EnhancerDB
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Enhancers that have rs553476054[chr15:45930948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 45921685 45943627 enh16095
Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr15 45930863 45931040 vista19850
VISTA
Transcript factors that have rs553476054[chr15:45930948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 45930928 45930949 IRF1 JASPAR yes 23143349
chr15 45930928 45930949 IRF1 JASPAR yes 70518260
chr15 45930930 45930951 IRF1 JASPAR yes 23143350
chr15 45930930 45930951 IRF1 JASPAR yes 70518261
chr15 45930934 45930949 FOXP1 JASPAR yes 23143351
chr15 45930934 45930949 FOXP1 JASPAR yes 70518262
chr15 45930934 45930955 IRF1 JASPAR yes 23143352
chr15 45930934 45930955 IRF1 JASPAR yes 70518263
chr15 45930935 45930950 FOXP1 JASPAR yes 23143353
chr15 45930935 45930950 FOXP1 JASPAR yes 70518264
chr15 45930935 45930956 IRF1 JASPAR yes 23143354
chr15 45930935 45930956 IRF1 JASPAR yes 70518265
chr15 45930936 45930951 FOXP1 JASPAR yes 23143355
chr15 45930936 45930951 FOXP1 JASPAR yes 70518266
chr15 45930936 45930957 IRF1 JASPAR yes 23143356
chr15 45930936 45930957 IRF1 JASPAR yes 70518267
chr15 45930937 45930952 FOXP1 JASPAR yes 23143357
chr15 45930937 45930952 FOXP1 JASPAR yes 70518268
chr15 45930937 45930958 IRF1 JASPAR yes 23143358
chr15 45930937 45930958 IRF1 JASPAR yes 70518269
chr15 45930938 45930953 FOXP1 JASPAR yes 23143359
chr15 45930938 45930953 FOXP1 JASPAR yes 70518270
chr15 45930942 45930963 IRF1 JASPAR yes 23143360
chr15 45930942 45930963 IRF1 JASPAR yes 70518271
chr15 45930943 45930964 IRF1 JASPAR yes 23143361
chr15 45930943 45930964 IRF1 JASPAR yes 70518272
chr15 45930946 45930960 STAT1 JASPAR yes 23143362
chr15 45930946 45930960 STAT1 JASPAR yes 70518273
chr15 45930946 45930961 PRDM1 JASPAR yes 23143363
chr15 45930946 45930961 STAT2 JASPAR yes 23143364
chr15 45930946 45930961 PRDM1 JASPAR yes 70518274
chr15 45930946 45930961 STAT2 JASPAR yes 70518275
chr15 45930947 45930962 PRDM1 JASPAR yes 23143365
chr15 45930947 45930962 PRDM1 JASPAR yes 70518276
Genes associated with rs553476054[chr15:45930948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More