EnhancerDB
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  3. vista20417[chr15:67394592-67394967]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20417[chr15:67394592-67394967]
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Tissue distribution of vista20417
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Transcription factor that possibly regulate vista20417[chr15:67394592-67394967]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 67394245 67394868 EP300 UCSC Txn Factor no Conserved 108149384
chr15 67394406 67394972 NFIC UCSC Txn Factor no Conserved 108149390
chr15 67394454 67394989 RUNX3 UCSC Txn Factor no Conserved 108149399
chr15 67394464 67394967 ATF2 UCSC Txn Factor no Conserved 108149401
chr15 67394466 67394916 FOXM1 UCSC Txn Factor no Conserved 108149403
chr15 67394482 67394792 POU2F2 UCSC Txn Factor no Conserved 108149411
chr15 67394519 67394766 BHLHE40 UCSC Txn Factor no Conserved 108149417
chr15 67394580 67394600 RREB1 JASPAR yes 24207750
chr15 67394580 67394600 RREB1 JASPAR yes 70545996
chr15 67394584 67394604 RREB1 JASPAR yes 24207751
chr15 67394584 67394604 RREB1 JASPAR yes 70545997
chr15 67394586 67394606 RREB1 JASPAR yes 24207752
chr15 67394586 67394606 RREB1 JASPAR yes 70545998
chr15 67394588 67394608 RREB1 JASPAR yes 24207753
chr15 67394588 67394608 RREB1 JASPAR yes 70545999
chr15 67394590 67394610 RREB1 JASPAR yes 24207754
chr15 67394590 67394610 RREB1 JASPAR yes 70546000
chr15 67394592 67394612 RREB1 JASPAR yes 24207755
chr15 67394592 67394612 RREB1 JASPAR yes 70546001
chr15 67394594 67394614 RREB1 JASPAR yes 24207756
chr15 67394594 67394614 RREB1 JASPAR yes 70546002
chr15 67394596 67394616 RREB1 JASPAR yes 24207757
chr15 67394596 67394616 RREB1 JASPAR yes 70546003
chr15 67394669 67394683 JUN JASPAR yes 24207758
chr15 67394669 67394683 JUN JASPAR yes 70546004
chr15 67394671 67394682 BATF JASPAR yes 24207759
chr15 67394671 67394682 BATF JASPAR yes 70546005
chr15 67394672 67394683 FOSL2 JASPAR yes 24207760
chr15 67394672 67394683 JUNB JASPAR yes 24207761
chr15 67394672 67394683 FOSL2 JASPAR yes 70546006
chr15 67394672 67394683 JUNB JASPAR yes 70546007
chr15 67394673 67394684 FOS JASPAR yes 24207762
chr15 67394673 67394684 FOSL1 JASPAR yes 24207763
chr15 67394673 67394684 JUND JASPAR yes 24207764
chr15 67394673 67394684 NFE2 JASPAR yes 24207765
chr15 67394673 67394684 FOS JASPAR yes 70546008
chr15 67394673 67394684 FOSL1 JASPAR yes 70546009
chr15 67394673 67394684 JUND JASPAR yes 70546010
chr15 67394673 67394684 NFE2 JASPAR yes 70546011
chr15 67394674 67394683 JDP2 JASPAR yes 24207766
chr15 67394674 67394683 JDP2 JASPAR yes 70546012
chr15 67394674 67394688 JUN JASPAR yes 24207767
chr15 67394674 67394688 JUN JASPAR yes 70546013
chr15 67394675 67394682 JUN TRANSFAC yes 24207768
chr15 67394675 67394682 JUN TRANSFAC yes 70546014
chr15 67394675 67394686 BATF JASPAR yes 24207769
chr15 67394675 67394686 BATF JASPAR yes 70546015
chr15 67394686 67394689 MYB TRANSFAC yes 24207770
chr15 67394686 67394689 MYB TRANSFAC yes 70546016
chr15 67394687 67394697 MYF6 JASPAR yes 24207771
chr15 67394687 67394697 MYF6 JASPAR yes 70546017
chr15 67394692 67394707 FOXP1 JASPAR yes 24207772
chr15 67394692 67394707 FOXP1 JASPAR yes 70546018
chr15 67394737 67394753 SOX4 JASPAR yes 24207773
chr15 67394737 67394753 SOX4 JASPAR yes 70546019
chr15 67394745 67394765 TP53 JASPAR yes 24207774
chr15 67394745 67394765 TP53 JASPAR yes 70546020
chr15 67394753 67394759 HiNF-A TRANSFAC yes 24207775
chr15 67394753 67394759 HiNF-A TRANSFAC yes 70546021
chr15 67394756 67394766 TBX21 JASPAR yes 24207776
chr15 67394756 67394766 TBX21 JASPAR yes 70546022
chr15 67394756 67394767 TBX20 JASPAR yes 24207777
chr15 67394756 67394767 TBX2 JASPAR yes 24207778
chr15 67394756 67394767 TBX20 JASPAR yes 70546023
chr15 67394756 67394767 TBX2 JASPAR yes 70546024
chr15 67394756 67394769 EOMES JASPAR yes 24207779
chr15 67394756 67394769 EOMES JASPAR yes 70546025
chr15 67394757 67394767 TBR1 JASPAR yes 24207780
chr15 67394757 67394767 TBR1 JASPAR yes 70546026
chr15 67394767 67394776 NKX3-2 JASPAR yes 24207781
chr15 67394767 67394776 NKX3-2 JASPAR yes 70546027
chr15 67394767 67394777 NKX2-3 JASPAR yes 24207782
chr15 67394767 67394777 NKX2-3 JASPAR yes 70546028
chr15 67394768 67394776 ISL2 JASPAR yes 24207783
chr15 67394768 67394776 ISL2 JASPAR yes 70546029
chr15 67394768 67394777 NKX2-8 JASPAR yes 24207784
chr15 67394768 67394777 NKX2-8 JASPAR yes 70546030
chr15 67394776 67394786 TBX21 JASPAR yes 24207785
chr15 67394776 67394786 TBX21 JASPAR yes 70546031
chr15 67394776 67394787 TBX20 JASPAR yes 24207786
chr15 67394776 67394787 TBX2 JASPAR yes 24207787
chr15 67394776 67394787 TBX20 JASPAR yes 70546032
chr15 67394776 67394787 TBX2 JASPAR yes 70546033
chr15 67394776 67394789 EOMES JASPAR yes 24207788
chr15 67394776 67394789 EOMES JASPAR yes 70546034
chr15 67394777 67394787 TBR1 JASPAR yes 24207789
chr15 67394777 67394787 TBR1 JASPAR yes 70546035
chr15 67394816 67394826 TEAD1 JASPAR yes 24207790
chr15 67394816 67394826 TEAD4 JASPAR yes 24207791
chr15 67394816 67394826 TEAD1 JASPAR yes 70546036
chr15 67394816 67394826 TEAD4 JASPAR yes 70546037
chr15 67394837 67394843 ZNF354C JASPAR yes 24207792
chr15 67394837 67394843 ZNF354C JASPAR yes 70546038
chr15 67394859 67394863 NFE TRANSFAC yes 24207793
chr15 67394859 67394863 NFE TRANSFAC yes 70546039
chr15 67394878 67394899 REST JASPAR yes 24207794
chr15 67394878 67394899 REST JASPAR yes 70546040
chr15 67394879 67394898 REST JASPAR yes 24207795
chr15 67394879 67394898 REST JASPAR yes 70546041
chr15 67394888 67394898 TBX21 JASPAR yes 24207796
chr15 67394888 67394898 TBX21 JASPAR yes 70546042
chr15 67394888 67394899 TBX2 JASPAR yes 24207797
chr15 67394888 67394899 TBX2 JASPAR yes 70546043
chr15 67394888 67394901 EOMES JASPAR yes 24207798
chr15 67394888 67394901 EOMES JASPAR yes 70546044
chr15 67394921 67394939 TP73 JASPAR yes 24207799
chr15 67394921 67394939 TP73 JASPAR yes 70546045
chr15 67394964 67394968 H1TF2 TRANSFAC yes 24207800
chr15 67394964 67394968 NFE TRANSFAC yes 24207801
chr15 67394964 67394968 SRF TRANSFAC yes 24207802
chr15 67394964 67394968 H1TF2 TRANSFAC yes 70546046
chr15 67394964 67394968 NFE TRANSFAC yes 70546047
chr15 67394964 67394968 SRF TRANSFAC yes 70546048
SNP sites on vista20417[chr15:67394592-67394967]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 67394664 rs77712190 A G
ATF2 BHLHE40 EP300 FOXM1 NFIC POU2F2 RUNX3
4043844
chr15 67394823 rs143475232 C G
ATF2 EP300 FOXM1 NFIC RUNX3 TEAD1 TEAD4
4043845
chr15 67394921 rs12901820 C G
ATF2 NFIC RUNX3 TP73
4043846
chr15 67394939 rs116306434 C T
ATF2 NFIC RUNX3 TP73
4043847
chr15 67394963 rs12901719 A G
ATF2 NFIC RUNX3
4043848
Genes possibly regulated by vista20417[chr15:67394592-67394967]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 67356101 67487533 + SMAD3 ENSG00000166949.11 67356101 0.69 1.0 14051 61509
chr15 67435072 67439277 - RP11-342M21.2 ENSG00000259202.1 67439277 1.0 1.0 14052 55690
Expression level of Genes
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miRNAs possibly regulated by vista20417[chr15:67394592-67394967]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results