EnhancerDB
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  3. rs12901820[chr15:67394921]
Enhancers that have rs12901820[chr15:67394921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67361222 67430135 enh3672
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr15 67394592 67394967 vista20417
VISTA
Transcript factors that have rs12901820[chr15:67394921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67393034 67395039 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21662513
chr15 67393034 67395039 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108149341
chr15 67393034 67395039 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108149342
chr15 67394395 67394971 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108149388
chr15 67394406 67394972 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21662555
chr15 67394406 67394972 NFIC UCSC Txn Factor no Conserved 108149390
chr15 67394406 67394972 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108149391
chr15 67394432 67395022 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21662559
chr15 67394432 67395022 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108149395
chr15 67394451 67394927 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21662562
chr15 67394451 67394927 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108149398
chr15 67394454 67394989 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21662563
chr15 67394454 67394989 RUNX3 UCSC Txn Factor no Conserved 108149399
chr15 67394454 67394989 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108149400
chr15 67394464 67394967 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21662564
chr15 67394464 67394967 ATF2 UCSC Txn Factor no Conserved 108149401
chr15 67394464 67394967 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108149402
chr15 67394473 67394936 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21662568
chr15 67394473 67394936 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108149407
chr15 67394549 67394949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21662588
chr15 67394549 67394949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108149430
chr15 67394773 67395173 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21662594
chr15 67394773 67395173 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108149436
chr15 67394921 67394939 TP73 JASPAR yes 24207799
chr15 67394921 67394939 TP73 JASPAR yes 70546045
Genes associated with rs12901820[chr15:67394921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More