EnhancerDB
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  3. vista20419[chr15:67401891-67402640]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20419[chr15:67401891-67402640]
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Tissue distribution of vista20419
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Transcription factor that possibly regulate vista20419[chr15:67401891-67402640]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 67401626 67402428 EP300 UCSC Txn Factor no Conserved 108149529
chr15 67401693 67402363 TCF12 UCSC Txn Factor no Conserved 108149531
chr15 67401740 67402307 NR3C1 UCSC Txn Factor no Conserved 108149534
chr15 67401798 67402318 BCL3 UCSC Txn Factor no Conserved 108149536
chr15 67401868 67402384 CEBPB UCSC Txn Factor no Conserved 108149542
chr15 67401908 67402306 EBF1 UCSC Txn Factor no Conserved 108149547
chr15 67401942 67402275 BHLHE40 UCSC Txn Factor no Conserved 108149556
chr15 67402003 67402267 PAX5 UCSC Txn Factor no Conserved 108149575
chr15 67401883 67401895 TEAD1 JASPAR yes 24208679
chr15 67401883 67401895 TEAD1 JASPAR yes 70546154
chr15 67401885 67401895 TEAD1 JASPAR yes 24208680
chr15 67401885 67401895 TEAD4 JASPAR yes 24208681
chr15 67401885 67401895 TEAD1 JASPAR yes 70546155
chr15 67401885 67401895 TEAD4 JASPAR yes 70546156
chr15 67401886 67401894 TEAD3 JASPAR yes 24208682
chr15 67401886 67401894 TEAD3 JASPAR yes 70546157
chr15 67401914 67401920 HiNF-A TRANSFAC yes 24208683
chr15 67401914 67401920 HiNF-A TRANSFAC yes 70546158
chr15 67401914 67401929 SOX21 JASPAR yes 24208684
chr15 67401914 67401929 SOX21 JASPAR yes 70546159
chr15 67401915 67401928 POU3F3 JASPAR yes 24208685
chr15 67401915 67401928 POU3F3 JASPAR yes 70546160
chr15 67401915 67401929 POU1F1 JASPAR yes 24208686
chr15 67401915 67401929 POU1F1 JASPAR yes 70546161
chr15 67401916 67401928 POU3F1 JASPAR yes 24208687
chr15 67401916 67401928 POU3F2 JASPAR yes 24208688
chr15 67401916 67401928 POU3F1 JASPAR yes 70546162
chr15 67401916 67401928 POU3F2 JASPAR yes 70546163
chr15 67401930 67401941 CEBPA JASPAR yes 24208689
chr15 67401930 67401941 CEBPA JASPAR yes 70546164
chr15 67401934 67401940 TCF4 TRANSFAC yes 24208690
chr15 67401934 67401940 TCF4 TRANSFAC yes 70546165
chr15 67401958 67401968 GSX2 JASPAR yes 24208691
chr15 67401958 67401968 HOXB2 JASPAR yes 24208692
chr15 67401958 67401968 HOXB3 JASPAR yes 24208693
chr15 67401958 67401968 MNX1 JASPAR yes 24208694
chr15 67401958 67401968 POU6F1 JASPAR yes 24208695
chr15 67401958 67401968 GSX2 JASPAR yes 70546166
chr15 67401958 67401968 HOXB2 JASPAR yes 70546167
chr15 67401958 67401968 HOXB3 JASPAR yes 70546168
chr15 67401958 67401968 MNX1 JASPAR yes 70546169
chr15 67401958 67401968 POU6F1 JASPAR yes 70546170
chr15 67401958 67401969 HOXA10 JASPAR yes 24208696
chr15 67401958 67401969 HOXA10 JASPAR yes 70546171
chr15 67401959 67401967 LMX1A JASPAR yes 24208697
chr15 67401959 67401967 LMX1B JASPAR yes 24208698
chr15 67401959 67401967 NKX6-1 JASPAR yes 24208699
chr15 67401959 67401967 NKX6-2 JASPAR yes 24208700
chr15 67401959 67401967 VAX1 JASPAR yes 24208701
chr15 67401959 67401967 VAX2 JASPAR yes 24208702
chr15 67401959 67401967 VSX1 JASPAR yes 24208703
chr15 67401959 67401967 VSX2 JASPAR yes 24208704
chr15 67401959 67401967 LMX1A JASPAR yes 70546172
chr15 67401959 67401967 LMX1B JASPAR yes 70546173
chr15 67401959 67401967 NKX6-1 JASPAR yes 70546174
chr15 67401959 67401967 NKX6-2 JASPAR yes 70546175
chr15 67401959 67401967 VAX1 JASPAR yes 70546176
chr15 67401959 67401967 VAX2 JASPAR yes 70546177
chr15 67401959 67401967 VSX1 JASPAR yes 70546178
chr15 67401959 67401967 VSX2 JASPAR yes 70546179
chr15 67401966 67401972 HiNF-A TRANSFAC yes 24208705
chr15 67401966 67401972 HiNF-A TRANSFAC yes 70546180
chr15 67401980 67401986 SOX10 JASPAR yes 24208706
chr15 67401980 67401986 SOX10 JASPAR yes 70546181
chr15 67401982 67402003 ZNF263 JASPAR yes 24208707
chr15 67401982 67402003 ZNF263 JASPAR yes 70546182
chr15 67401983 67401998 PRDM1 JASPAR yes 24208708
chr15 67401983 67401998 PRDM1 JASPAR yes 70546183
chr15 67401985 67402006 IRF1 JASPAR yes 24208709
chr15 67401985 67402006 ZNF263 JASPAR yes 24208710
chr15 67401985 67402006 IRF1 JASPAR yes 70546184
chr15 67401985 67402006 ZNF263 JASPAR yes 70546185
chr15 67401986 67401991 ETS2 TRANSFAC yes 24208711
chr15 67401986 67401991 ETS2 TRANSFAC yes 70546186
chr15 67401988 67402009 ZNF263 JASPAR yes 24208712
chr15 67401988 67402009 ZNF263 JASPAR yes 70546187
chr15 67401989 67402004 PRDM1 JASPAR yes 24208713
chr15 67401989 67402004 PRDM1 JASPAR yes 70546188
chr15 67401989 67402007 IRF2 JASPAR yes 24208714
chr15 67401989 67402007 IRF2 JASPAR yes 70546189
chr15 67401997 67402007 MZF1 JASPAR yes 24208715
chr15 67401997 67402007 MZF1 JASPAR yes 70546190
chr15 67402005 67402011 HiNF-A TRANSFAC yes 24208716
chr15 67402005 67402011 HiNF-A TRANSFAC yes 70546191
chr15 67402008 67402017 NKX3-2 JASPAR yes 24208717
chr15 67402008 67402017 NKX3-2 JASPAR yes 70546192
chr15 67402009 67402017 ISL2 JASPAR yes 24208718
chr15 67402009 67402017 ISL2 JASPAR yes 70546193
chr15 67402022 67402036 JUN JASPAR yes 24208719
chr15 67402022 67402036 JUN JASPAR yes 70546194
chr15 67402024 67402035 BATF JASPAR yes 24208720
chr15 67402024 67402035 BATF JASPAR yes 70546195
chr15 67402028 67402034 JUN TRANSFAC yes 24208721
chr15 67402028 67402034 JUN TRANSFAC yes 70546196
chr15 67402038 67402042 H1TF2 TRANSFAC yes 24208722
chr15 67402038 67402042 NFE TRANSFAC yes 24208723
chr15 67402038 67402042 SRF TRANSFAC yes 24208724
chr15 67402038 67402042 H1TF2 TRANSFAC yes 70546197
chr15 67402038 67402042 NFE TRANSFAC yes 70546198
chr15 67402038 67402042 SRF TRANSFAC yes 70546199
chr15 67402064 67402081 RARA JASPAR yes 24208725
chr15 67402064 67402081 RXRA JASPAR yes 24208726
chr15 67402064 67402081 RARA JASPAR yes 70546200
chr15 67402064 67402081 RXRA JASPAR yes 70546201
chr15 67402069 67402080 USF1 JASPAR yes 24208727
chr15 67402069 67402080 USF1 JASPAR yes 70546202
chr15 67402071 67402084 NR2F1 JASPAR yes 24208728
chr15 67402071 67402084 NR2F1 JASPAR yes 70546203
chr15 67402071 67402089 TP63 JASPAR yes 24208729
chr15 67402071 67402089 TP63 JASPAR yes 70546204
chr15 67402094 67402099 MYC TRANSFAC yes 24208730
chr15 67402094 67402099 MYC TRANSFAC yes 70546205
chr15 67402095 67402108 ATF4 JASPAR yes 24208731
chr15 67402095 67402108 ATF4 JASPAR yes 70546206
chr15 67402116 67402135 PAX5 JASPAR yes 24208732
chr15 67402116 67402135 PAX5 JASPAR yes 70546207
chr15 67402134 67402149 JUND JASPAR yes 24208733
chr15 67402134 67402149 JUND JASPAR yes 70546208
chr15 67402135 67402148 JUN JASPAR yes 24208734
chr15 67402135 67402148 JUN JASPAR yes 70546209
chr15 67402137 67402149 JDP2 JASPAR yes 24208735
chr15 67402137 67402149 JDP2 JASPAR yes 70546210
chr15 67402141 67402161 ESR1 JASPAR yes 24208736
chr15 67402141 67402161 ESR1 JASPAR yes 70546211
chr15 67402142 67402156 TLX1 JASPAR yes 24208737
chr15 67402142 67402156 TLX1 JASPAR yes 70546212
chr15 67402157 67402171 GLIS2 JASPAR yes 24208738
chr15 67402157 67402171 GLIS3 JASPAR yes 24208739
chr15 67402157 67402171 GLIS2 JASPAR yes 70546213
chr15 67402157 67402171 GLIS3 JASPAR yes 70546214
chr15 67402162 67402173 ETV2 JASPAR yes 24208740
chr15 67402162 67402173 ETV2 JASPAR yes 70546215
chr15 67402163 67402173 ERF JASPAR yes 24208741
chr15 67402163 67402173 ETS1 JASPAR yes 24208742
chr15 67402163 67402173 ERF JASPAR yes 70546216
chr15 67402163 67402173 ETS1 JASPAR yes 70546217
chr15 67402163 67402174 ELK4 JASPAR yes 24208743
chr15 67402163 67402174 FLI1 JASPAR yes 24208744
chr15 67402163 67402174 ELK4 JASPAR yes 70546218
chr15 67402163 67402174 FLI1 JASPAR yes 70546219
chr15 67402177 67402186 THAP1 JASPAR yes 24208745
chr15 67402177 67402186 THAP1 JASPAR yes 70546220
chr15 67402179 67402185 YY1 JASPAR yes 24208746
chr15 67402179 67402185 YY1 JASPAR yes 70546221
chr15 67402198 67402219 ZNF263 JASPAR yes 24208747
chr15 67402198 67402219 ZNF263 JASPAR yes 70546222
chr15 67402209 67402219 SP1 JASPAR yes 24208748
chr15 67402209 67402219 SP1 JASPAR yes 70546223
chr15 67402216 67402235 PAX5 JASPAR yes 24208749
chr15 67402216 67402235 PAX5 JASPAR yes 70546224
chr15 67402226 67402237 E2F6 JASPAR yes 24208750
chr15 67402226 67402237 E2F6 JASPAR yes 70546225
chr15 67402249 67402256 GATA3 TRANSFAC yes 24208751
chr15 67402249 67402256 GATA3 TRANSFAC yes 70546226
chr15 67402249 67402257 GATA5 JASPAR yes 24208752
chr15 67402249 67402257 GATA5 JASPAR yes 70546227
chr15 67402252 67402255 MYB TRANSFAC yes 24208753
chr15 67402252 67402255 MYB TRANSFAC yes 70546228
chr15 67402304 67402315 STAT1 JASPAR yes 24208754
chr15 67402304 67402315 STAT3 JASPAR yes 24208755
chr15 67402304 67402315 STAT1 JASPAR yes 70546229
chr15 67402304 67402315 STAT3 JASPAR yes 70546230
chr15 67402329 67402333 YY1 TRANSFAC yes 24208756
chr15 67402329 67402333 YY1 TRANSFAC yes 70546231
chr15 67402329 67402337 HOXA5 JASPAR yes 24208757
chr15 67402329 67402337 HOXA5 JASPAR yes 70546232
chr15 67402362 67402374 TEAD1 JASPAR yes 24208758
chr15 67402362 67402374 TEAD1 JASPAR yes 70546233
chr15 67402366 67402381 FOXA1 JASPAR yes 24208759
chr15 67402366 67402381 FOXA1 JASPAR yes 70546234
chr15 67402368 67402380 FOXC2 JASPAR yes 24208760
chr15 67402368 67402380 FOXC2 JASPAR yes 70546235
chr15 67402370 67402381 FOXA1 JASPAR yes 24208761
chr15 67402370 67402381 FOXA1 JASPAR yes 70546236
chr15 67402410 67402415 ETS2 TRANSFAC yes 24208762
chr15 67402410 67402415 ETS2 TRANSFAC yes 70546237
chr15 67402419 67402424 GATA2 JASPAR yes 24208763
chr15 67402419 67402424 GATA2 JASPAR yes 70546238
chr15 67402472 67402487 AR JASPAR yes 24208764
chr15 67402472 67402487 AR JASPAR yes 70546239
chr15 67402485 67402503 ESR1 JASPAR yes 24208765
chr15 67402485 67402503 ESR1 JASPAR yes 70546240
chr15 67402496 67402510 EBF1 JASPAR yes 24208766
chr15 67402496 67402510 EBF1 JASPAR yes 70546241
chr15 67402514 67402524 EMX1 JASPAR yes 24208767
chr15 67402514 67402524 EMX2 JASPAR yes 24208768
chr15 67402514 67402524 EVX1 JASPAR yes 24208769
chr15 67402514 67402524 EVX2 JASPAR yes 24208770
chr15 67402514 67402524 GSX1 JASPAR yes 24208771
chr15 67402514 67402524 HOXB2 JASPAR yes 24208772
chr15 67402514 67402524 HOXB3 JASPAR yes 24208773
chr15 67402514 67402524 LHX2 JASPAR yes 24208774
chr15 67402514 67402524 LHX6 JASPAR yes 24208775
chr15 67402514 67402524 MEOX1 JASPAR yes 24208776
chr15 67402514 67402524 POU6F1 JASPAR yes 24208777
chr15 67402514 67402524 EMX1 JASPAR yes 70546242
chr15 67402514 67402524 EMX2 JASPAR yes 70546243
chr15 67402514 67402524 EVX1 JASPAR yes 70546244
chr15 67402514 67402524 EVX2 JASPAR yes 70546245
chr15 67402514 67402524 GSX1 JASPAR yes 70546246
chr15 67402514 67402524 HOXB2 JASPAR yes 70546247
chr15 67402514 67402524 HOXB3 JASPAR yes 70546248
chr15 67402514 67402524 LHX2 JASPAR yes 70546249
chr15 67402514 67402524 LHX6 JASPAR yes 70546250
chr15 67402514 67402524 MEOX1 JASPAR yes 70546251
chr15 67402514 67402524 POU6F1 JASPAR yes 70546252
chr15 67402515 67402523 LBX1 JASPAR yes 24208778
chr15 67402515 67402523 PDX1 JASPAR yes 24208779
chr15 67402515 67402523 VAX1 JASPAR yes 24208780
chr15 67402515 67402523 VAX2 JASPAR yes 24208781
chr15 67402515 67402523 VSX1 JASPAR yes 24208782
chr15 67402515 67402523 VSX2 JASPAR yes 24208783
chr15 67402515 67402523 LBX1 JASPAR yes 70546253
chr15 67402515 67402523 PDX1 JASPAR yes 70546254
chr15 67402515 67402523 VAX1 JASPAR yes 70546255
chr15 67402515 67402523 VAX2 JASPAR yes 70546256
chr15 67402515 67402523 VSX1 JASPAR yes 70546257
chr15 67402515 67402523 VSX2 JASPAR yes 70546258
chr15 67402515 67402525 POU6F2 JASPAR yes 24208784
chr15 67402515 67402525 POU6F2 JASPAR yes 70546259
chr15 67402516 67402529 POU3F3 JASPAR yes 24208785
chr15 67402516 67402529 POU3F3 JASPAR yes 70546260
chr15 67402522 67402527 GATA2 JASPAR yes 24208786
chr15 67402522 67402527 GATA2 JASPAR yes 70546261
chr15 67402524 67402539 AR JASPAR yes 24208787
chr15 67402524 67402539 AR JASPAR yes 70546262
chr15 67402553 67402565 INSM1 JASPAR yes 24208788
chr15 67402553 67402565 INSM1 JASPAR yes 70546263
chr15 67402561 67402566 GATA2 JASPAR yes 24208789
chr15 67402561 67402566 GATA2 JASPAR yes 70546264
SNP sites on vista20419[chr15:67401891-67402640]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 67401977 rs11071934 G A
BCL3 BHLHE40 CEBPB EBF1 EP300 NR3C1 TCF12
4043957
chr15 67402005 rs200525508 GA G
BCL3 BHLHE40 CEBPB EBF1 EP300 HiNF-A IRF1 IRF2 MZF1 NR3C1 PAX5 TCF12 ZNF263
4043958
chr15 67402019 rs142059915 G T
BCL3 BHLHE40 CEBPB EBF1 EP300 NR3C1 PAX5 TCF12
4043959
chr15 67402080 rs193161411 C T
BCL3 BHLHE40 CEBPB EBF1 EP300 NR2F1 NR3C1 PAX5 RARA RXRA TCF12 TP63 USF1
4043960
chr15 67402084 rs146341008 C T
BCL3 BHLHE40 CEBPB EBF1 EP300 NR2F1 NR3C1 PAX5 TCF12 TP63
4043961
chr15 67402085 rs139603542 G A,C,T
BCL3 BHLHE40 CEBPB EBF1 EP300 NR3C1 PAX5 TCF12 TP63
4043962
chr15 67402222 rs142187758 G A
BCL3 BHLHE40 CEBPB EBF1 EP300 NR3C1 PAX5 TCF12
4043963
chr15 67402241 rs115432162 C T
BCL3 BHLHE40 CEBPB EBF1 EP300 NR3C1 PAX5 TCF12
4043964
chr15 67402459 rs542588659 C T no 4043965
chr15 67402508 rs189924557 G T
EBF1
4043966
chr15 67402528 rs62006018 C T
AR POU3F3
4043967
chr15 67402561 rs576494995 G A
GATA2 INSM1
4043968
chr15 67402567 rs73481497 C T no 4043969
chr15 67402572 rs77748788 C T no 4043970
chr15 67402609 rs151194416 T C no 4043971
Genes possibly regulated by vista20419[chr15:67401891-67402640]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 67356101 67487533 + SMAD3 ENSG00000166949.11 67356101 0.69 1.0 14051 54210
chr15 67435072 67439277 - RP11-342M21.2 ENSG00000259202.1 67439277 1.0 1.0 14052 63363
Expression level of Genes
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miRNAs possibly regulated by vista20419[chr15:67401891-67402640]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results