EnhancerDB
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  3. rs189924557[chr15:67402508]
Enhancers that have rs189924557[chr15:67402508]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67361222 67430135 enh3672
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr15 67401891 67402640 vista20419
VISTA
Transcript factors that have rs189924557[chr15:67402508]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67402168 67402994 P63 GTRD no Skin (Keratinocyte) 21662695
chr15 67402168 67402994 P63 GTRD no Skin (Keratinocyte) 108149590
chr15 67402291 67403030 P63 GTRD no Skin (Keratinocyte) 21662696
chr15 67402291 67403030 P63 GTRD no Skin (Keratinocyte) 108149591
chr15 67402330 67402614 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108149592
chr15 67402382 67402818 P63 GTRD no Skin (Keratinocyte) 21662697
chr15 67402382 67402818 P63 GTRD no Skin (Keratinocyte) 108149593
chr15 67402496 67402510 EBF1 JASPAR yes 24208766
chr15 67402496 67402510 EBF1 JASPAR yes 70546241
Genes associated with rs189924557[chr15:67402508], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr15 67356101 67487533 + SMAD3 ENSG00000166949.11 67356101 0 Lung 0.189015 14051