EnhancerDB
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  3. vista21866[chr16:11448700-11449053]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21866[chr16:11448700-11449053]
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Tissue distribution of vista21866
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Transcription factor that possibly regulate vista21866[chr16:11448700-11449053]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 11448558 11449348 RUNX3 UCSC Txn Factor no Conserved 108181679
chr16 11448621 11448759 CEBPB UCSC Txn Factor no Conserved 108181686
chr16 11448682 11448974 YY1 UCSC Txn Factor no Conserved 108181694
chr16 11449027 11449184 SRF UCSC Txn Factor no Conserved 108181712
chr16 11448692 11448707 RUNX2 JASPAR yes 9508975
chr16 11448692 11448707 RUNX2 JASPAR yes 49341505
chr16 11448696 11448706 RUNX3 JASPAR yes 9508976
chr16 11448696 11448706 RUNX3 JASPAR yes 49341506
chr16 11448697 11448706 RUNX2 JASPAR yes 9508977
chr16 11448697 11448706 RUNX2 JASPAR yes 49341507
chr16 11448716 11448719 MYB TRANSFAC yes 9508978
chr16 11448716 11448719 MYB TRANSFAC yes 49341508
chr16 11448717 11448733 SOX8 JASPAR yes 9508979
chr16 11448717 11448733 SOX8 JASPAR yes 49341509
chr16 11448719 11448734 PRDM1 JASPAR yes 9508980
chr16 11448719 11448734 PRDM1 JASPAR yes 49341510
chr16 11448731 11448745 PAX6 JASPAR yes 9508981
chr16 11448731 11448745 PAX6 JASPAR yes 49341511
chr16 11448738 11448748 RELA JASPAR yes 9508982
chr16 11448738 11448748 RELA JASPAR yes 49341512
chr16 11448749 11448763 BATF3 JASPAR yes 9508983
chr16 11448749 11448763 BATF3 JASPAR yes 49341513
chr16 11448750 11448762 JDP2 JASPAR yes 9508984
chr16 11448750 11448762 JDP2 JASPAR yes 49341514
chr16 11448750 11448765 JUND JASPAR yes 9508985
chr16 11448750 11448765 JUND JASPAR yes 49341515
chr16 11448751 11448764 JUN JASPAR yes 9508986
chr16 11448751 11448764 JUN JASPAR yes 49341516
chr16 11448752 11448759 JUN TRANSFAC yes 9508987
chr16 11448752 11448759 JUN TRANSFAC yes 49341517
chr16 11448765 11448773 FOXO3 JASPAR yes 9508988
chr16 11448765 11448773 FOXO3 JASPAR yes 49341518
chr16 11448767 11448779 TAL1 JASPAR yes 9508989
chr16 11448767 11448779 TAL1 JASPAR yes 49341519
chr16 11448768 11448780 BHLHE23 JASPAR yes 9508990
chr16 11448768 11448780 BHLHE23 JASPAR yes 49341520
chr16 11448769 11448779 BHLHE22 JASPAR yes 9508991
chr16 11448769 11448779 NEUROD2 JASPAR yes 9508992
chr16 11448769 11448779 NEUROG2 JASPAR yes 9508993
chr16 11448769 11448779 OLIG1 JASPAR yes 9508994
chr16 11448769 11448779 OLIG2 JASPAR yes 9508995
chr16 11448769 11448779 OLIG3 JASPAR yes 9508996
chr16 11448769 11448779 BHLHE22 JASPAR yes 49341521
chr16 11448769 11448779 NEUROD2 JASPAR yes 49341522
chr16 11448769 11448779 NEUROG2 JASPAR yes 49341523
chr16 11448769 11448779 OLIG1 JASPAR yes 49341524
chr16 11448769 11448779 OLIG2 JASPAR yes 49341525
chr16 11448769 11448779 OLIG3 JASPAR yes 49341526
chr16 11448769 11448781 TAL1 JASPAR yes 9508997
chr16 11448769 11448781 TAL1 JASPAR yes 49341527
chr16 11448783 11448795 IRF1 JASPAR yes 9508998
chr16 11448783 11448795 IRF1 JASPAR yes 49341528
chr16 11448792 11448806 E2F7 JASPAR yes 9508999
chr16 11448792 11448806 E2F7 JASPAR yes 49341529
chr16 11448796 11448805 NFIX JASPAR yes 9509000
chr16 11448796 11448805 NFIX JASPAR yes 49341530
chr16 11448796 11448806 NFIA JASPAR yes 9509001
chr16 11448796 11448806 NFIA JASPAR yes 49341531
chr16 11448798 11448804 NFIC JASPAR yes 9509002
chr16 11448798 11448804 NFIC JASPAR yes 49341532
chr16 11448807 11448819 YY1 JASPAR yes 9509003
chr16 11448807 11448819 YY1 JASPAR yes 49341533
chr16 11448810 11448816 YY1 JASPAR yes 9509004
chr16 11448810 11448816 YY1 JASPAR yes 49341534
chr16 11448826 11448838 ZBTB7B JASPAR yes 9509005
chr16 11448826 11448838 ZBTB7C JASPAR yes 9509006
chr16 11448826 11448838 ZBTB7B JASPAR yes 49341535
chr16 11448826 11448838 ZBTB7C JASPAR yes 49341536
chr16 11448827 11448839 TFAP2A JASPAR yes 9509007
chr16 11448827 11448839 TFAP2A JASPAR yes 49341537
chr16 11448831 11448837 SP1 TRANSFAC yes 9509008
chr16 11448831 11448837 SP1 TRANSFAC yes 49341538
chr16 11448858 11448862 LFA1 TRANSFAC yes 9509009
chr16 11448858 11448862 LFA1 TRANSFAC yes 49341539
chr16 11448864 11448885 IRF1 JASPAR yes 9509010
chr16 11448864 11448885 IRF1 JASPAR yes 49341540
chr16 11448867 11448881 SPI1 JASPAR yes 9509011
chr16 11448867 11448881 SPIC JASPAR yes 9509012
chr16 11448867 11448881 SPI1 JASPAR yes 49341541
chr16 11448867 11448881 SPIC JASPAR yes 49341542
chr16 11448871 11448885 RXRB JASPAR yes 9509013
chr16 11448871 11448885 RXRG JASPAR yes 9509014
chr16 11448871 11448885 RXRB JASPAR yes 49341543
chr16 11448871 11448885 RXRG JASPAR yes 49341544
chr16 11448871 11448886 NR2C2 JASPAR yes 9509015
chr16 11448871 11448886 NR2C2 JASPAR yes 49341545
chr16 11448876 11448887 ESRRA JASPAR yes 9509016
chr16 11448876 11448887 ESRRA JASPAR yes 49341546
chr16 11448891 11448912 IRF1 JASPAR yes 9509017
chr16 11448891 11448912 IRF1 JASPAR yes 49341547
chr16 11448893 11448908 IRF9 JASPAR yes 9509018
chr16 11448893 11448908 IRF9 JASPAR yes 49341548
chr16 11448894 11448908 IRF7 JASPAR yes 9509019
chr16 11448894 11448908 IRF8 JASPAR yes 9509020
chr16 11448894 11448908 IRF7 JASPAR yes 49341549
chr16 11448894 11448908 IRF8 JASPAR yes 49341550
chr16 11448896 11448908 IRF1 JASPAR yes 9509021
chr16 11448896 11448908 IRF1 JASPAR yes 49341551
chr16 11448931 11448946 STAT1 JASPAR yes 9509022
chr16 11448931 11448946 STAT1 JASPAR yes 49341552
chr16 11448933 11448944 STAT1 JASPAR yes 9509023
chr16 11448933 11448944 STAT3 JASPAR yes 9509024
chr16 11448933 11448944 STAT1 JASPAR yes 49341553
chr16 11448933 11448944 STAT3 JASPAR yes 49341554
chr16 11448951 11448955 YY1 TRANSFAC yes 9509025
chr16 11448951 11448955 YY1 TRANSFAC yes 49341555
chr16 11448952 11448966 E2F7 JASPAR yes 9509026
chr16 11448952 11448966 E2F7 JASPAR yes 49341556
chr16 11448953 11448965 E2F8 JASPAR yes 9509027
chr16 11448953 11448965 E2F8 JASPAR yes 49341557
chr16 11448954 11448968 GLIS3 JASPAR yes 9509028
chr16 11448954 11448968 GLIS3 JASPAR yes 49341558
chr16 11448978 11448982 YY1 TRANSFAC yes 9509029
chr16 11448978 11448982 YY1 TRANSFAC yes 49341559
chr16 11448983 11448993 MSC JASPAR yes 9509030
chr16 11448983 11448993 MSC JASPAR yes 49341560
chr16 11448995 11449004 NFIX JASPAR yes 9509031
chr16 11448995 11449004 NFIX JASPAR yes 49341561
chr16 11448995 11449005 NFIA JASPAR yes 9509032
chr16 11448995 11449005 NFIA JASPAR yes 49341562
chr16 11448997 11449003 NFIC JASPAR yes 9509033
chr16 11448997 11449003 NFIC JASPAR yes 49341563
chr16 11449053 11449059 SOX10 JASPAR yes 9509034
chr16 11449053 11449059 SOX10 JASPAR yes 49341564
SNP sites on vista21866[chr16:11448700-11449053]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 11448715 rs188954925 G C
CEBPB RUNX3 YY1
4317421
chr16 11448876 rs541160490 C G
ESRRA IRF1 NR2C2 RUNX3 RXRB RXRG SPI1 SPIC YY1
4317422
chr16 11448974 rs117890063 A G
RUNX3 YY1
4317423
chr16 11448976 rs531639573 C G,T
RUNX3
4317424
chr16 11449004 rs140769594 G A
NFIA NFIX RUNX3
4317425
Genes possibly regulated by vista21866[chr16:11448700-11449053]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 11348262 11350036 - SOCS1 ENSG00000185338.4 11350036 0.81 0.99 14541 1336
chr16 11361605 11363390 - TNP2 ENSG00000178279.3 11363390 1.0 0.0 14542 14690
chr16 11367144 11367452 - PRM3 ENSG00000178257.2 11367452 0.0 1.0 14543 18752
chr16 11369496 11370337 - PRM2 ENSG00000122304.6 11370337 0.66 0.97 14544 21637
chr16 11374693 11375207 - PRM1 ENSG00000175646.3 11375207 0.78 1.0 14545 26507
Expression level of Genes
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miRNAs possibly regulated by vista21866[chr16:11448700-11449053]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results