EnhancerDB
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  3. rs541160490[chr16:11448876]
Enhancers that have rs541160490[chr16:11448876]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11445105 11460875 enh3886
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr16 11448700 11449053 vista21866
VISTA
Transcript factors that have rs541160490[chr16:11448876]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11448479 11449075 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690690
chr16 11448479 11449075 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181671
chr16 11448519 11448919 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690691
chr16 11448519 11448919 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181672
chr16 11448530 11448940 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690692
chr16 11448530 11448940 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181673
chr16 11448551 11448987 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690695
chr16 11448551 11448987 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181676
chr16 11448554 11448964 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690696
chr16 11448554 11448964 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181677
chr16 11448558 11448993 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690697
chr16 11448558 11448993 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181678
chr16 11448558 11449348 RUNX3 UCSC Txn Factor no Conserved 108181679
chr16 11448562 11448942 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690698
chr16 11448562 11448942 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181680
chr16 11448566 11448946 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690699
chr16 11448566 11448946 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181681
chr16 11448599 11448947 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690700
chr16 11448599 11448947 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181682
chr16 11448609 11448889 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690702
chr16 11448609 11448889 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181684
chr16 11448620 11448884 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690703
chr16 11448620 11448884 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181685
chr16 11448621 11448905 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690704
chr16 11448621 11448905 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181687
chr16 11448631 11448901 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690705
chr16 11448631 11448901 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181688
chr16 11448632 11448892 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690706
chr16 11448632 11448892 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181689
chr16 11448639 11449163 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108181690
chr16 11448668 11449264 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690708
chr16 11448668 11449264 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181692
chr16 11448682 11448974 YY1 UCSC Txn Factor no Conserved 108181694
chr16 11448685 11449045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690710
chr16 11448685 11449045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181695
chr16 11448708 11449144 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690711
chr16 11448708 11449144 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181696
chr16 11448724 11449244 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690712
chr16 11448724 11449244 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181697
chr16 11448734 11449298 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690713
chr16 11448734 11449298 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181698
chr16 11448745 11449281 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690714
chr16 11448745 11449281 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181699
chr16 11448746 11449266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690715
chr16 11448746 11449266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181700
chr16 11448756 11449205 ZNF143 GTRD no Epithelial (MCF-7) 21690716
chr16 11448756 11449205 ZNF143 GTRD no Epithelial (MCF-7) 108181701
chr16 11448757 11449287 ZNF143 GTRD no Epithelial (MCF-7) 21690717
chr16 11448757 11449287 ZNF143 GTRD no Epithelial (MCF-7) 108181702
chr16 11448764 11449219 TCF7L2 GTRD no Colon (HCT116) 21690718
chr16 11448764 11449219 TCF7L2 GTRD no Colon (HCT116) 108181703
chr16 11448781 11449217 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690719
chr16 11448781 11449217 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181704
chr16 11448795 11449205 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690722
chr16 11448795 11449205 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181707
chr16 11448813 11449177 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690723
chr16 11448813 11449177 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181708
chr16 11448841 11449431 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690724
chr16 11448841 11449431 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181709
chr16 11448864 11448885 IRF1 JASPAR yes 9509010
chr16 11448864 11448885 IRF1 JASPAR yes 49341540
chr16 11448867 11448881 SPI1 JASPAR yes 9509011
chr16 11448867 11448881 SPIC JASPAR yes 9509012
chr16 11448867 11448881 SPI1 JASPAR yes 49341541
chr16 11448867 11448881 SPIC JASPAR yes 49341542
chr16 11448871 11448885 RXRB JASPAR yes 9509013
chr16 11448871 11448885 RXRG JASPAR yes 9509014
chr16 11448871 11448885 RXRB JASPAR yes 49341543
chr16 11448871 11448885 RXRG JASPAR yes 49341544
chr16 11448871 11448886 NR2C2 JASPAR yes 9509015
chr16 11448871 11448886 NR2C2 JASPAR yes 49341545
chr16 11448876 11448887 ESRRA JASPAR yes 9509016
chr16 11448876 11448887 ESRRA JASPAR yes 49341546
Genes associated with rs541160490[chr16:11448876], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More