EnhancerDB
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  3. vista21953[chr16:14107471-14107706]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21953[chr16:14107471-14107706]
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Tissue distribution of vista21953
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Transcription factor that possibly regulate vista21953[chr16:14107471-14107706]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 14107473 14107483 CLOCK JASPAR yes 9659320
chr16 14107473 14107483 MYF6 JASPAR yes 9659321
chr16 14107473 14107483 NEUROG2 JASPAR yes 9659322
chr16 14107473 14107483 CLOCK JASPAR yes 49345956
chr16 14107473 14107483 MYF6 JASPAR yes 49345957
chr16 14107473 14107483 NEUROG2 JASPAR yes 49345958
chr16 14107503 14107513 MAX JASPAR yes 9659323
chr16 14107503 14107513 MAX JASPAR yes 49345959
chr16 14107515 14107525 OLIG3 JASPAR yes 9659324
chr16 14107515 14107525 OLIG3 JASPAR yes 49345960
chr16 14107519 14107523 YY1 TRANSFAC yes 9659325
chr16 14107519 14107523 YY1 TRANSFAC yes 49345961
chr16 14107521 14107527 TCF4 TRANSFAC yes 9659326
chr16 14107521 14107527 TCF4 TRANSFAC yes 49345962
chr16 14107521 14107536 FOXP1 JASPAR yes 9659327
chr16 14107521 14107536 FOXP1 JASPAR yes 49345963
chr16 14107522 14107531 SRY JASPAR yes 9659328
chr16 14107522 14107531 SRY JASPAR yes 49345964
chr16 14107522 14107533 FOXP2 JASPAR yes 9659329
chr16 14107522 14107533 FOXP2 JASPAR yes 49345965
chr16 14107522 14107534 FOXC2 JASPAR yes 9659330
chr16 14107522 14107534 FOXC2 JASPAR yes 49345966
chr16 14107524 14107535 FOXA1 JASPAR yes 9659331
chr16 14107524 14107535 FOXA1 JASPAR yes 49345967
chr16 14107546 14107553 NFATC2 JASPAR yes 9659332
chr16 14107546 14107553 NFATC2 JASPAR yes 49345968
chr16 14107552 14107564 MEF2A JASPAR yes 9659333
chr16 14107552 14107564 MEF2B JASPAR yes 9659334
chr16 14107552 14107564 MEF2D JASPAR yes 9659335
chr16 14107552 14107564 MEF2A JASPAR yes 49345969
chr16 14107552 14107564 MEF2B JASPAR yes 49345970
chr16 14107552 14107564 MEF2D JASPAR yes 49345971
chr16 14107561 14107573 TAL1 JASPAR yes 9659336
chr16 14107561 14107573 TAL1 JASPAR yes 49345972
chr16 14107562 14107575 ZBTB18 JASPAR yes 9659337
chr16 14107562 14107575 ZBTB18 JASPAR yes 49345973
chr16 14107571 14107577 TCF4 TRANSFAC yes 9659338
chr16 14107571 14107577 TCF4 TRANSFAC yes 49345974
chr16 14107580 14107593 DUXA JASPAR yes 9659339
chr16 14107580 14107593 DUXA JASPAR yes 49345975
chr16 14107581 14107592 DUX4 JASPAR yes 9659340
chr16 14107581 14107592 DUX4 JASPAR yes 49345976
chr16 14107583 14107588 MYB TRANSFAC yes 9659341
chr16 14107583 14107588 MYB TRANSFAC yes 49345977
chr16 14107585 14107591 JUN TRANSFAC yes 9659342
chr16 14107585 14107591 JUN TRANSFAC yes 49345978
chr16 14107590 14107605 HNF4G JASPAR yes 9659343
chr16 14107590 14107605 NR2C2 JASPAR yes 9659344
chr16 14107590 14107605 HNF4G JASPAR yes 49345979
chr16 14107590 14107605 NR2C2 JASPAR yes 49345980
chr16 14107591 14107606 HNF4A JASPAR yes 9659345
chr16 14107591 14107606 HNF4A JASPAR yes 49345981
chr16 14107593 14107597 LFA1 TRANSFAC yes 9659346
chr16 14107593 14107597 LFA1 TRANSFAC yes 49345982
chr16 14107636 14107641 GATA2 JASPAR yes 9659347
chr16 14107636 14107641 GATA2 JASPAR yes 49345983
chr16 14107647 14107657 MSC JASPAR yes 9659348
chr16 14107647 14107657 MSC JASPAR yes 49345984
chr16 14107656 14107659 MYB TRANSFAC yes 9659349
chr16 14107656 14107659 MYB TRANSFAC yes 49345985
chr16 14107687 14107705 NR3C1 JASPAR yes 9659350
chr16 14107687 14107705 NR3C1 JASPAR yes 49345986
SNP sites on vista21953[chr16:14107471-14107706]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 14107475 rs113834345 A C
CLOCK MYF6 NEUROG2
4340750
chr16 14107591 rs201390403 CA C
DUX4 DUXA HNF4A HNF4G JUN NR2C2
4340751
chr16 14107612 rs539465002 T C no 4340752
Genes possibly regulated by vista21953[chr16:14107471-14107706]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 14014014 14046202 + ERCC4 ENSG00000175595.10 14014014 0.81 0.98 14560 6543
chr16 14165178 14360630 + MKL2 ENSG00000186260.12 14165178 0.7 1.0 14561 42528
Expression level of Genes
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miRNAs possibly regulated by vista21953[chr16:14107471-14107706]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results