EnhancerDB
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  3. rs539465002[chr16:14107612]
Enhancers that have rs539465002[chr16:14107612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14103805 14116115 enh16567
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Lung Lung (A549) Stomach Placenta Thyroid Uterus Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Heart
chr16 14107471 14107706 vista21953
VISTA
Transcript factors that have rs539465002[chr16:14107612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14107294 14107738 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108183594
chr16 14107303 14107683 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108183595
chr16 14107313 14107709 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692095
chr16 14107313 14107709 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108183596
chr16 14107323 14107893 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21692096
chr16 14107323 14107893 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108183597
chr16 14107337 14107627 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108183598
chr16 14107362 14107626 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692097
chr16 14107362 14107626 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108183599
chr16 14107481 14107949 ZNF143 GTRD no Epithelial (MCF-7) 21692098
chr16 14107481 14107949 ZNF143 GTRD no Epithelial (MCF-7) 108183600
chr16 14107536 14107812 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692099
chr16 14107536 14107812 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108183601
chr16 14107562 14107826 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21692100
chr16 14107562 14107826 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108183602
Genes associated with rs539465002[chr16:14107612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More