EnhancerDB
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  3. vista22260[chr16:27263252-27263592]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22260[chr16:27263252-27263592]
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Tissue distribution of vista22260
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Transcription factor that possibly regulate vista22260[chr16:27263252-27263592]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 27263258 27263272 RXRG JASPAR yes 10180674
chr16 27263258 27263272 RXRG JASPAR yes 49360471
chr16 27263258 27263273 NR2C2 JASPAR yes 10180675
chr16 27263258 27263273 NR2C2 JASPAR yes 49360472
chr16 27263261 27263282 ZNF263 JASPAR yes 10180676
chr16 27263261 27263282 ZNF263 JASPAR yes 49360473
chr16 27263307 27263317 RELA JASPAR yes 10180677
chr16 27263307 27263317 RELA JASPAR yes 49360474
chr16 27263307 27263320 NFKB1 JASPAR yes 10180678
chr16 27263307 27263320 NFKB1 JASPAR yes 49360475
chr16 27263308 27263319 NFKB1 JASPAR yes 10180679
chr16 27263308 27263319 NFKB1 JASPAR yes 49360476
chr16 27263343 27263362 PAX5 JASPAR yes 10180680
chr16 27263343 27263362 PAX5 JASPAR yes 49360477
chr16 27263358 27263362 LFA1 TRANSFAC yes 10180681
chr16 27263358 27263362 LFA1 TRANSFAC yes 49360478
chr16 27263382 27263386 NFE TRANSFAC yes 10180682
chr16 27263382 27263386 NFE TRANSFAC yes 49360479
chr16 27263410 27263420 REL JASPAR yes 10180683
chr16 27263410 27263420 REL JASPAR yes 49360480
chr16 27263410 27263421 NFKB1 JASPAR yes 10180684
chr16 27263410 27263421 NFKB1 JASPAR yes 49360481
chr16 27263461 27263472 FOS JASPAR yes 10180685
chr16 27263461 27263472 FOSL1 JASPAR yes 10180686
chr16 27263461 27263472 JUND JASPAR yes 10180687
chr16 27263461 27263472 FOS JASPAR yes 49360482
chr16 27263461 27263472 FOSL1 JASPAR yes 49360483
chr16 27263461 27263472 JUND JASPAR yes 49360484
chr16 27263462 27263471 JDP2 JASPAR yes 10180688
chr16 27263462 27263471 JDP2 JASPAR yes 49360485
chr16 27263462 27263473 FOSL2 JASPAR yes 10180689
chr16 27263462 27263473 JUNB JASPAR yes 10180690
chr16 27263462 27263473 FOSL2 JASPAR yes 49360486
chr16 27263462 27263473 JUNB JASPAR yes 49360487
chr16 27263462 27263476 JUN JASPAR yes 10180691
chr16 27263462 27263476 JUN JASPAR yes 49360488
chr16 27263463 27263474 BATF JASPAR yes 10180692
chr16 27263463 27263474 BATF JASPAR yes 49360489
chr16 27263490 27263508 SRF JASPAR yes 10180693
chr16 27263490 27263508 SRF JASPAR yes 49360490
chr16 27263495 27263505 GSX1 JASPAR yes 10180694
chr16 27263495 27263505 GSX1 JASPAR yes 49360491
chr16 27263496 27263509 JUN JASPAR yes 10180695
chr16 27263496 27263509 JUN JASPAR yes 49360492
chr16 27263511 27263517 NFIC JASPAR yes 10180696
chr16 27263511 27263517 NFIC JASPAR yes 49360493
chr16 27263536 27263540 ESR1 TRANSFAC yes 10180697
chr16 27263536 27263540 ESR1 TRANSFAC yes 49360494
chr16 27263546 27263557 NFE2L2 JASPAR yes 10180698
chr16 27263546 27263557 NFE2L2 JASPAR yes 49360495
chr16 27263549 27263559 SP1 JASPAR yes 10180699
chr16 27263549 27263559 SP1 JASPAR yes 49360496
chr16 27263556 27263567 HOXA10 JASPAR yes 10180700
chr16 27263556 27263567 HOXA10 JASPAR yes 49360497
chr16 27263557 27263567 HOXB13 JASPAR yes 10180701
chr16 27263557 27263567 HOXD13 JASPAR yes 10180702
chr16 27263557 27263567 HOXB13 JASPAR yes 49360498
chr16 27263557 27263567 HOXD13 JASPAR yes 49360499
chr16 27263561 27263567 TBP TRANSFAC yes 10180703
chr16 27263561 27263567 TBP TRANSFAC yes 49360500
chr16 27263586 27263592 MZF1 JASPAR yes 10180704
chr16 27263586 27263592 MZF1 JASPAR yes 49360501
chr16 27263589 27263593 H1TF2 TRANSFAC yes 10180705
chr16 27263589 27263593 NFE TRANSFAC yes 10180706
chr16 27263589 27263593 SRF TRANSFAC yes 10180707
chr16 27263589 27263593 H1TF2 TRANSFAC yes 49360502
chr16 27263589 27263593 NFE TRANSFAC yes 49360503
chr16 27263589 27263593 SRF TRANSFAC yes 49360504
SNP sites on vista22260[chr16:27263252-27263592]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 27263277 rs574523487 TCCTCAACGCAGGGAGGCTG T
ZNF263
4394588
chr16 27263327 rs189810704 T C no 4394589
chr16 27263363 rs552444542 AG A no 4394590
chr16 27263458 rs146112936 A T no 4394591
chr16 27263473 rs572376493 T C
BATF FOSL2 JUN JUNB
4394592
Genes possibly regulated by vista22260[chr16:27263252-27263592]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 27214807 27233089 + KDM8 ENSG00000155666.7 27214807 0.96 0.99 14665 51555
chr16 27236312 27280115 - NSMCE1 ENSG00000169189.12 27280115 0.66 1.0 14666 83477
chr16 27279526 27301813 + CTD-3203P2.2 ENSG00000245888.2 27279526 0.76 1.0 14667 84066
chr16 27324989 27376099 + IL4R ENSG00000077238.9 27324989 0.79 1.0 14668 38603
Expression level of Genes
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miRNAs possibly regulated by vista22260[chr16:27263252-27263592]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results