EnhancerDB
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  3. vista22317[chr16:29137517-29137756]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22317[chr16:29137517-29137756]
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Tissue distribution of vista22317
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Transcription factor that possibly regulate vista22317[chr16:29137517-29137756]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 29137278 29137584 POLR2A UCSC Txn Factor no Conserved 108191326
chr16 29137533 29137542 TFAP2A JASPAR yes 10243118
chr16 29137533 29137542 TFAP2A JASPAR yes 49363248
chr16 29137538 29137543 SP1 TRANSFAC yes 10243119
chr16 29137538 29137543 SP1 TRANSFAC yes 49363249
chr16 29137550 29137562 FOXI1 JASPAR yes 10243120
chr16 29137550 29137562 FOXI1 JASPAR yes 49363250
chr16 29137555 29137574 RFX2 JASPAR yes 10243121
chr16 29137555 29137574 RFX2 JASPAR yes 49363251
chr16 29137593 29137604 NRL JASPAR yes 10243122
chr16 29137593 29137604 NRL JASPAR yes 49363252
chr16 29137593 29137608 MAFK JASPAR yes 10243123
chr16 29137593 29137608 MAFK JASPAR yes 49363253
chr16 29137616 29137632 SOX4 JASPAR yes 10243124
chr16 29137616 29137632 SOX4 JASPAR yes 49363254
chr16 29137628 29137639 E2F6 JASPAR yes 10243125
chr16 29137628 29137639 E2F6 JASPAR yes 49363255
chr16 29137650 29137654 YY1 TRANSFAC yes 10243126
chr16 29137650 29137654 YY1 TRANSFAC yes 49363256
chr16 29137659 29137674 STAT1 JASPAR yes 10243127
chr16 29137659 29137674 STAT1 JASPAR yes 49363257
chr16 29137661 29137672 STAT1 JASPAR yes 10243128
chr16 29137661 29137672 STAT3 JASPAR yes 10243129
chr16 29137661 29137672 STAT1 JASPAR yes 49363258
chr16 29137661 29137672 STAT3 JASPAR yes 49363259
chr16 29137663 29137684 IRF1 JASPAR yes 10243130
chr16 29137663 29137684 IRF1 JASPAR yes 49363260
chr16 29137667 29137681 SPI1 JASPAR yes 10243131
chr16 29137667 29137681 SPIC JASPAR yes 10243132
chr16 29137667 29137681 SPI1 JASPAR yes 49363261
chr16 29137667 29137681 SPIC JASPAR yes 49363262
chr16 29137667 29137682 STAT2 JASPAR yes 10243133
chr16 29137667 29137682 STAT2 JASPAR yes 49363263
chr16 29137668 29137681 ELF1 JASPAR yes 10243134
chr16 29137668 29137681 ELF1 JASPAR yes 49363264
chr16 29137671 29137678 SPIB JASPAR yes 10243135
chr16 29137671 29137678 SPIB JASPAR yes 49363265
chr16 29137673 29137688 FOXP1 JASPAR yes 10243136
chr16 29137673 29137688 FOXP1 JASPAR yes 49363266
chr16 29137676 29137687 FOXP2 JASPAR yes 10243137
chr16 29137676 29137687 FOXP2 JASPAR yes 49363267
chr16 29137680 29137686 HiNF-A TRANSFAC yes 10243138
chr16 29137680 29137686 HiNF-A TRANSFAC yes 49363268
chr16 29137684 29137701 RARA JASPAR yes 10243139
chr16 29137684 29137701 RXRA JASPAR yes 10243140
chr16 29137684 29137701 RARA JASPAR yes 49363269
chr16 29137684 29137701 RXRA JASPAR yes 49363270
chr16 29137692 29137710 RARA JASPAR yes 10243141
chr16 29137692 29137710 RARA JASPAR yes 49363271
chr16 29137745 29137749 NFE TRANSFAC yes 10243142
chr16 29137745 29137749 NFE TRANSFAC yes 49363272
SNP sites on vista22317[chr16:29137517-29137756]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 29137588 rs1642009 T C no 4401635
chr16 29137594 rs141856410 A T
MAFK NRL
4401636
chr16 29137630 rs186927511 C G,T
E2F6 SOX4
4401637
Genes possibly regulated by vista22317[chr16:29137517-29137756]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 29049923 29064047 + CTB-134H23.2 ENSG00000196796.4 29049923 0.86 1.0 14698 12406
Expression level of Genes
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miRNAs possibly regulated by vista22317[chr16:29137517-29137756]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results