EnhancerDB
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  3. vista23289[chr16:85343472-85343805]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23289[chr16:85343472-85343805]
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Tissue distribution of vista23289
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Transcription factor that possibly regulate vista23289[chr16:85343472-85343805]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85343460 85343682 SPI1 UCSC Txn Factor no Conserved 108213654
chr16 85343485 85343490 SP1 TRANSFAC yes 12045442
chr16 85343485 85343490 SP1 TRANSFAC yes 49407399
chr16 85343491 85343503 INSM1 JASPAR yes 12045443
chr16 85343491 85343503 INSM1 JASPAR yes 49407400
chr16 85343493 85343507 PLAG1 JASPAR yes 12045444
chr16 85343493 85343507 PLAG1 JASPAR yes 49407401
chr16 85343501 85343511 ZNF740 JASPAR yes 12045445
chr16 85343501 85343511 ZNF740 JASPAR yes 49407402
chr16 85343504 85343518 PLAG1 JASPAR yes 12045446
chr16 85343504 85343518 PLAG1 JASPAR yes 49407403
chr16 85343511 85343516 SP1 TRANSFAC yes 12045447
chr16 85343511 85343516 SP1 TRANSFAC yes 49407404
chr16 85343517 85343532 RFX5 JASPAR yes 12045448
chr16 85343517 85343532 RFX5 JASPAR yes 49407405
chr16 85343546 85343561 FOXP1 JASPAR yes 12045449
chr16 85343546 85343561 FOXP1 JASPAR yes 49407406
chr16 85343552 85343558 TBP TRANSFAC yes 12045450
chr16 85343552 85343558 TBP TRANSFAC yes 49407407
chr16 85343554 85343568 SPI1 JASPAR yes 12045451
chr16 85343554 85343568 SPI1 JASPAR yes 49407408
chr16 85343565 85343575 SP1 JASPAR yes 12045452
chr16 85343565 85343575 SP1 JASPAR yes 49407409
chr16 85343567 85343572 SP1 TRANSFAC yes 12045453
chr16 85343567 85343572 SP1 TRANSFAC yes 49407410
chr16 85343567 85343573 SP1 TRANSFAC yes 12045454
chr16 85343567 85343573 SP1 TRANSFAC yes 49407411
chr16 85343572 85343576 ESR1 TRANSFAC yes 12045455
chr16 85343572 85343576 ESR1 TRANSFAC yes 49407412
chr16 85343588 85343599 USF1 JASPAR yes 12045456
chr16 85343588 85343599 USF1 JASPAR yes 49407413
chr16 85343598 85343613 RFX5 JASPAR yes 12045457
chr16 85343598 85343613 RFX5 JASPAR yes 49407414
chr16 85343619 85343625 LEF1 TRANSFAC yes 12045458
chr16 85343619 85343625 SOX10 JASPAR yes 12045459
chr16 85343619 85343625 LEF1 TRANSFAC yes 49407415
chr16 85343619 85343625 SOX10 JASPAR yes 49407416
chr16 85343623 85343632 PITX3 JASPAR yes 12045460
chr16 85343623 85343632 PITX3 JASPAR yes 49407417
chr16 85343624 85343632 RHOXF1 JASPAR yes 12045461
chr16 85343624 85343632 RHOXF1 JASPAR yes 49407418
chr16 85343636 85343640 NFE TRANSFAC yes 12045462
chr16 85343636 85343640 NFE TRANSFAC yes 49407419
chr16 85343660 85343675 TP53 JASPAR yes 12045463
chr16 85343660 85343675 TP53 JASPAR yes 49407420
chr16 85343676 85343685 NKX3-2 JASPAR yes 12045464
chr16 85343676 85343685 NKX3-2 JASPAR yes 49407421
chr16 85343698 85343702 NFE TRANSFAC yes 12045465
chr16 85343698 85343702 NFE TRANSFAC yes 49407422
chr16 85343699 85343706 E2F1 TRANSFAC yes 12045466
chr16 85343699 85343706 E2F1 TRANSFAC yes 49407423
chr16 85343728 85343732 LFA1 TRANSFAC yes 12045467
chr16 85343728 85343732 LFA1 TRANSFAC yes 49407424
chr16 85343759 85343765 NFE2 TRANSFAC yes 12045468
chr16 85343759 85343765 NFE2 TRANSFAC yes 49407425
chr16 85343761 85343781 RREB1 JASPAR yes 12045469
chr16 85343761 85343781 RREB1 JASPAR yes 49407426
chr16 85343767 85343777 FIGLA JASPAR yes 12045470
chr16 85343767 85343777 MSC JASPAR yes 12045471
chr16 85343767 85343777 TCF3 JASPAR yes 12045472
chr16 85343767 85343777 FIGLA JASPAR yes 49407427
chr16 85343767 85343777 MSC JASPAR yes 49407428
chr16 85343767 85343777 TCF3 JASPAR yes 49407429
chr16 85343768 85343777 SNAI2 JASPAR yes 12045473
chr16 85343768 85343777 SNAI2 JASPAR yes 49407430
chr16 85343769 85343774 USF2 TRANSFAC yes 12045474
chr16 85343769 85343774 USF2 TRANSFAC yes 49407431
chr16 85343780 85343791 E2F1 JASPAR yes 12045475
chr16 85343780 85343791 E2F1 JASPAR yes 49407432
chr16 85343792 85343797 SP1 TRANSFAC yes 12045476
chr16 85343792 85343797 SP1 TRANSFAC yes 49407433
chr16 85343793 85343813 TP63 JASPAR yes 12045477
chr16 85343793 85343813 TP63 JASPAR yes 49407434
SNP sites on vista23289[chr16:85343472-85343805]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85343507 rs534987126 C G
PLAG1 SPI1 ZNF740
4620538
chr16 85343651 rs569314445 GAGCCCAGGCATA G
SPI1
4620539
chr16 85343679 rs539551977 C A
NKX3-2 SPI1
4620540
chr16 85343780 rs115869200 C T
E2F1 RREB1
4620541
Genes possibly regulated by vista23289[chr16:85343472-85343805]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85391069 85393055 + RP11-680G10.1 ENSG00000261567.1 85391069 0.83 1.0 15130 52736
Expression level of Genes
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miRNAs possibly regulated by vista23289[chr16:85343472-85343805]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 85775237 85775256 - hsa-miR-1910-3p MIMAT0026917 85784701 0.18812369267818974 0.842353 0.676023 634
Expression level of miRNAs
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