EnhancerDB
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  3. rs115869200[chr16:85343780]
Enhancers that have rs115869200[chr16:85343780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 85343472 85343805 vista23289
VISTA
Transcript factors that have rs115869200[chr16:85343780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 21723116
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213643
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213644
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213645
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 21723117
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213646
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213647
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213648
chr16 85343530 85345094 ZNF274 GTRD no Bone Marrow (K562) 21723120
chr16 85343530 85345094 ZNF274 GTRD no Bone Marrow (K562) 108213657
chr16 85343530 85345094 ZNF274 GTRD no Bone Marrow (K562) 108213658
chr16 85343530 85345094 ZNF274 GTRD no Bone Marrow (K562) 108213659
chr16 85343747 85344690 TCF7L2 GTRD no Colon (HCT116) 21723121
chr16 85343747 85344690 TCF7L2 GTRD no Colon (HCT116) 108213660
chr16 85343747 85344690 TCF7L2 GTRD no Colon (HCT116) 108213661
chr16 85343761 85343781 RREB1 JASPAR yes 12045469
chr16 85343761 85343781 RREB1 JASPAR yes 49407426
chr16 85343780 85343791 E2F1 JASPAR yes 12045475
chr16 85343780 85343791 E2F1 JASPAR yes 49407432
Genes associated with rs115869200[chr16:85343780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More