EnhancerDB
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  3. vista23483[chr16:88266286-88266434]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23483[chr16:88266286-88266434]
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Tissue distribution of vista23483
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Transcription factor that possibly regulate vista23483[chr16:88266286-88266434]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88266288 88266298 SREBF1 JASPAR yes 12268602
chr16 88266288 88266298 SREBF2 JASPAR yes 12268603
chr16 88266288 88266298 SREBF1 JASPAR yes 49416839
chr16 88266288 88266298 SREBF2 JASPAR yes 49416840
chr16 88266297 88266316 CTCF JASPAR yes 12268604
chr16 88266297 88266316 CTCF JASPAR yes 49416841
chr16 88266321 88266326 SP1 TRANSFAC yes 12268605
chr16 88266321 88266326 SP1 TRANSFAC yes 49416842
chr16 88266321 88266340 REST JASPAR yes 12268606
chr16 88266321 88266340 REST JASPAR yes 49416843
chr16 88266326 88266341 TFAP2C JASPAR yes 12268607
chr16 88266326 88266341 TFAP2C JASPAR yes 49416844
chr16 88266327 88266338 TFAP2A JASPAR yes 12268608
chr16 88266327 88266338 TFAP2B JASPAR yes 12268609
chr16 88266327 88266338 TFAP2C JASPAR yes 12268610
chr16 88266327 88266338 TFAP2A JASPAR yes 49416845
chr16 88266327 88266338 TFAP2B JASPAR yes 49416846
chr16 88266327 88266338 TFAP2C JASPAR yes 49416847
chr16 88266327 88266339 INSM1 JASPAR yes 12268611
chr16 88266327 88266339 INSM1 JASPAR yes 49416848
chr16 88266328 88266337 TFAP2A JASPAR yes 12268612
chr16 88266328 88266337 TFAP2A JASPAR yes 49416849
chr16 88266332 88266342 SP1 JASPAR yes 12268613
chr16 88266332 88266342 SP1 JASPAR yes 49416850
chr16 88266351 88266357 NFIC JASPAR yes 12268614
chr16 88266351 88266357 NFIC JASPAR yes 49416851
chr16 88266361 88266377 ZNF143 JASPAR yes 12268615
chr16 88266361 88266377 ZNF143 JASPAR yes 49416852
chr16 88266375 88266385 TFEC JASPAR yes 12268616
chr16 88266375 88266385 TFEC JASPAR yes 49416853
chr16 88266375 88266386 USF1 JASPAR yes 12268617
chr16 88266375 88266386 USF1 JASPAR yes 49416854
chr16 88266379 88266390 ESRRA JASPAR yes 12268618
chr16 88266379 88266390 ESRRB JASPAR yes 12268619
chr16 88266379 88266390 ESRRA JASPAR yes 49416855
chr16 88266379 88266390 ESRRB JASPAR yes 49416856
chr16 88266381 88266392 NKX2-8 TRANSFAC yes 12268620
chr16 88266381 88266392 NKX2-8 TRANSFAC yes 49416857
chr16 88266389 88266404 SOX21 JASPAR yes 12268621
chr16 88266389 88266404 SOX21 JASPAR yes 49416858
chr16 88266390 88266396 SOX10 JASPAR yes 12268622
chr16 88266390 88266396 SOX10 JASPAR yes 49416859
chr16 88266399 88266414 FOXP1 JASPAR yes 12268623
chr16 88266399 88266414 FOXP1 JASPAR yes 49416860
chr16 88266407 88266414 SPIB JASPAR yes 12268624
chr16 88266407 88266414 SPIB JASPAR yes 49416861
chr16 88266417 88266432 RFX5 JASPAR yes 12268625
chr16 88266417 88266432 RFX5 JASPAR yes 49416862
chr16 88266429 88266433 YY1 TRANSFAC yes 12268626
chr16 88266429 88266433 YY1 TRANSFAC yes 49416863
SNP sites on vista23483[chr16:88266286-88266434]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88266301 rs145563186 C T
CTCF
4659762
chr16 88266311 rs28464204 T C
CTCF
4659763
Genes possibly regulated by vista23483[chr16:88266286-88266434]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista23483[chr16:88266286-88266434]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 88535392 88535412 + hsa-miR-5189-3p MIMAT0027088 88519687 0.05367426093647641 0.916667 0.0 640
Expression level of miRNAs
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