EnhancerDB
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  3. rs28464204[chr16:88266311]
Enhancers that have rs28464204[chr16:88266311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
chr16 88266286 88266434 vista23483
VISTA
Transcript factors that have rs28464204[chr16:88266311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 21735446
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 108221839
chr16 88264321 88266563 TCF7L2 GTRD no Colon (HCT116) 21735456
chr16 88264321 88266563 TCF7L2 GTRD no Colon (HCT116) 108221840
chr16 88265406 88266436 TCF7L2 GTRD no Colon (HCT116) 21735544
chr16 88265406 88266436 TCF7L2 GTRD no Colon (HCT116) 108221841
chr16 88265429 88266435 ZNF143 GTRD no Epithelial (MCF-7) 21735546
chr16 88265429 88266435 ZNF143 GTRD no Epithelial (MCF-7) 108221842
chr16 88265431 88266484 ZNF143 GTRD no Epithelial (MCF-7) 21735547
chr16 88265431 88266484 ZNF143 GTRD no Epithelial (MCF-7) 108221843
chr16 88265439 88266484 ZNF143 GTRD no Epithelial (MCF-7) 21735548
chr16 88265439 88266484 ZNF143 GTRD no Epithelial (MCF-7) 108221844
chr16 88266297 88266316 CTCF JASPAR yes 12268604
chr16 88266297 88266316 CTCF JASPAR yes 49416841
Genes associated with rs28464204[chr16:88266311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More