EnhancerDB
  1. Home
  2. Enhancers
  3. vista23488[chr16:88338212-88338634]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23488[chr16:88338212-88338634]
Back to top
Tissue distribution of vista23488
Back to top
Transcription factor that possibly regulate vista23488[chr16:88338212-88338634]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88338001 88338311 NR3C1 UCSC Txn Factor no Conserved 108221911
chr16 88338237 88338460 CEBPB UCSC Txn Factor no Conserved 108221941
chr16 88338235 88338244 NKX2-8 JASPAR yes 12276136
chr16 88338235 88338244 NKX2-8 JASPAR yes 49417004
chr16 88338235 88338245 NKX2-3 JASPAR yes 12276137
chr16 88338235 88338245 NKX2-3 JASPAR yes 49417005
chr16 88338263 88338274 FOXA1 JASPAR yes 12276138
chr16 88338263 88338274 FOXA1 JASPAR yes 49417006
chr16 88338263 88338278 FOXA1 JASPAR yes 12276139
chr16 88338263 88338278 FOXA1 JASPAR yes 49417007
chr16 88338275 88338278 MYB TRANSFAC yes 12276140
chr16 88338275 88338278 MYB TRANSFAC yes 49417008
chr16 88338279 88338283 H1TF2 TRANSFAC yes 12276141
chr16 88338279 88338283 NFE TRANSFAC yes 12276142
chr16 88338279 88338283 SRF TRANSFAC yes 12276143
chr16 88338279 88338283 H1TF2 TRANSFAC yes 49417009
chr16 88338279 88338283 NFE TRANSFAC yes 49417010
chr16 88338279 88338283 SRF TRANSFAC yes 49417011
chr16 88338283 88338293 TEAD1 JASPAR yes 12276144
chr16 88338283 88338293 TEAD4 JASPAR yes 12276145
chr16 88338283 88338293 TEAD1 JASPAR yes 49417012
chr16 88338283 88338293 TEAD4 JASPAR yes 49417013
chr16 88338284 88338292 TEAD3 JASPAR yes 12276146
chr16 88338284 88338292 TEAD3 JASPAR yes 49417014
chr16 88338287 88338292 ETS2 TRANSFAC yes 12276147
chr16 88338287 88338292 ETS2 TRANSFAC yes 49417015
chr16 88338327 88338337 NHLH1 JASPAR yes 12276148
chr16 88338327 88338337 NHLH1 JASPAR yes 49417016
chr16 88338343 88338354 CEBPB JASPAR yes 12276149
chr16 88338343 88338354 CEBPB JASPAR yes 49417017
chr16 88338344 88338355 CEBPA JASPAR yes 12276150
chr16 88338344 88338355 CEBPA JASPAR yes 49417018
chr16 88338350 88338361 PHOX2A JASPAR yes 12276151
chr16 88338350 88338361 PHOX2A JASPAR yes 49417019
chr16 88338358 88338367 LEF1 TRANSFAC yes 12276152
chr16 88338358 88338367 LEF1 TRANSFAC yes 49417020
chr16 88338381 88338391 TEAD1 JASPAR yes 12276153
chr16 88338381 88338391 TEAD4 JASPAR yes 12276154
chr16 88338381 88338391 TEAD1 JASPAR yes 49417021
chr16 88338381 88338391 TEAD4 JASPAR yes 49417022
chr16 88338421 88338438 NR3C1 JASPAR yes 12276155
chr16 88338421 88338438 NR3C2 JASPAR yes 12276156
chr16 88338421 88338438 NR3C1 JASPAR yes 49417023
chr16 88338421 88338438 NR3C2 JASPAR yes 49417024
chr16 88338423 88338426 MYB TRANSFAC yes 12276157
chr16 88338423 88338426 MYB TRANSFAC yes 49417025
chr16 88338429 88338438 SRY JASPAR yes 12276158
chr16 88338429 88338438 SRY JASPAR yes 49417026
chr16 88338450 88338460 ID4 JASPAR yes 12276159
chr16 88338450 88338460 TCF3 JASPAR yes 12276160
chr16 88338450 88338460 TCF4 JASPAR yes 12276161
chr16 88338450 88338460 ID4 JASPAR yes 49417027
chr16 88338450 88338460 TCF3 JASPAR yes 49417028
chr16 88338450 88338460 TCF4 JASPAR yes 49417029
chr16 88338460 88338479 CTCF JASPAR yes 12276162
chr16 88338460 88338479 CTCF JASPAR yes 49417030
chr16 88338466 88338477 EBF1 JASPAR yes 12276163
chr16 88338466 88338477 EBF1 JASPAR yes 49417031
chr16 88338555 88338570 RUNX2 JASPAR yes 12276164
chr16 88338555 88338570 RUNX2 JASPAR yes 49417032
chr16 88338577 88338588 NFKB1 JASPAR yes 12276165
chr16 88338577 88338588 NFKB1 JASPAR yes 49417033
chr16 88338578 88338588 RELA JASPAR yes 12276166
chr16 88338578 88338588 REL JASPAR yes 12276167
chr16 88338578 88338588 RELA JASPAR yes 49417034
chr16 88338578 88338588 REL JASPAR yes 49417035
chr16 88338581 88338591 MZF1 JASPAR yes 12276168
chr16 88338581 88338591 MZF1 JASPAR yes 49417036
chr16 88338583 88338593 SP1 JASPAR yes 12276169
chr16 88338583 88338593 SP1 JASPAR yes 49417037
chr16 88338584 88338590 SP1 TRANSFAC yes 12276170
chr16 88338584 88338590 SP1 TRANSFAC yes 49417038
chr16 88338584 88338594 SP1 JASPAR yes 12276171
chr16 88338584 88338594 SP1 JASPAR yes 49417039
chr16 88338588 88338594 MZF1 JASPAR yes 12276172
chr16 88338588 88338594 MZF1 JASPAR yes 49417040
chr16 88338611 88338626 HSF1 JASPAR yes 12276173
chr16 88338611 88338626 HSF1 JASPAR yes 49417041
SNP sites on vista23488[chr16:88338212-88338634]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88338214 rs188343451 G A
NR3C1
4661080
chr16 88338218 rs191541836 T C
NR3C1
4661081
chr16 88338239 rs569693689 A T
CEBPB NKX2-3 NKX2-8 NR3C1
4661082
chr16 88338467 rs7404292 A G
CTCF EBF1
4661083
chr16 88338609 rs575380205 T A no 4661084
Genes possibly regulated by vista23488[chr16:88338212-88338634]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista23488[chr16:88338212-88338634]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 88535392 88535412 + hsa-miR-5189-3p MIMAT0027088 88519687 0.0766484813746774 0.916667 0.0 640
Expression level of miRNAs
Back to top