EnhancerDB
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  3. rs575380205[chr16:88338609]
Enhancers that have rs575380205[chr16:88338609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
chr16 88338212 88338634 vista23488
VISTA
Transcript factors that have rs575380205[chr16:88338609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88337968 88339260 ZNF274 GTRD no Bone Marrow (K562) 108221904
chr16 88337968 88339260 ZNF274 GTRD no Bone Marrow (K562) 108221905
chr16 88337983 88340927 ZNF143 GTRD no Epithelial (MCF-7) 108221908
chr16 88337983 88340927 ZNF143 GTRD no Epithelial (MCF-7) 108221909
chr16 88337983 88340927 ZNF143 GTRD no Epithelial (MCF-7) 108221910
chr16 88338004 88339360 ZNF143 GTRD no Epithelial (MCF-7) 108221912
chr16 88338014 88338628 TCF7L2 GTRD no Colon (HCT116) 108221914
chr16 88338015 88338935 ZNF143 GTRD no Epithelial (MCF-7) 108221915
chr16 88338024 88338701 ZNF274 GTRD no Bone Marrow (K562) 108221916
chr16 88338030 88338751 ZNF274 GTRD no Bone Marrow (K562) 108221917
chr16 88338060 88339254 ZNF274 GTRD no Bone Marrow (K562) 108221919
chr16 88338064 88338742 ZNF274 GTRD no Bone Marrow (K562) 108221920
chr16 88338087 88339509 TCF7L2 GTRD no Colon (HCT116) 108221921
chr16 88338092 88338723 TCF7L2 GTRD no Colon (HCT116) 108221922
chr16 88338093 88338639 ZNF274 GTRD no Bone Marrow (K562) 108221923
chr16 88338097 88338633 ZNF274 GTRD no Bone Marrow (K562) 108221924
chr16 88338108 88338609 TCF7L2 GTRD no Colon (HCT116) 108221925
chr16 88338118 88338655 ZNF274 GTRD no Bone Marrow (K562) 108221926
chr16 88338134 88338611 ZNF274 GTRD no Bone Marrow (K562) 108221930
chr16 88338138 88343321 ZNF143 GTRD no Epithelial (MCF-7) 108221932
chr16 88338138 88343321 ZNF143 GTRD no Epithelial (MCF-7) 108221933
chr16 88338155 88338623 ZNF274 GTRD no Bone Marrow (K562) 108221934
chr16 88338171 88338675 ZNF274 GTRD no Bone Marrow (K562) 108221937
chr16 88338210 88338740 ZNF143 GTRD no Epithelial (MCF-7) 108221940
chr16 88338353 88338613 ZNF274 GTRD no Bone Marrow (K562) 108221944
chr16 88338391 88338909 ZNF274 GTRD no Bone Marrow (K562) 108221945
Genes associated with rs575380205[chr16:88338609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More