EnhancerDB
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  3. vista23502[chr16:88557943-88558427]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23502[chr16:88557943-88558427]
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Tissue distribution of vista23502
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Transcription factor that possibly regulate vista23502[chr16:88557943-88558427]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88557911 88558629 GATA1 UCSC Txn Factor no Conserved 108222473
chr16 88557926 88558486 POLR2A UCSC Txn Factor no Conserved 108222474
chr16 88557984 88558465 CCNT2 UCSC Txn Factor no Conserved 108222476
chr16 88557992 88558455 HMGN3 UCSC Txn Factor no Conserved 108222478
chr16 88557994 88558350 RCOR1 UCSC Txn Factor no Conserved 108222481
chr16 88558010 88558434 TEAD4 UCSC Txn Factor no Conserved 108222485
chr16 88558046 88558744 GATA2 UCSC Txn Factor no Conserved 108222491
chr16 88558051 88558335 EGR1 UCSC Txn Factor no Conserved 108222493
chr16 88558053 88558415 PML UCSC Txn Factor no Conserved 108222496
chr16 88558055 88558420 TAL1 UCSC Txn Factor no Conserved 108222498
chr16 88558070 88558364 EP300 UCSC Txn Factor no Conserved 108222502
chr16 88558086 88558411 NR2F2 UCSC Txn Factor no Conserved 108222507
chr16 88558147 88558348 TRIM28 UCSC Txn Factor no Conserved 108222519
chr16 88558150 88558357 STAT5A UCSC Txn Factor no Conserved 108222521
chr16 88558176 88558396 BHLHE40 UCSC Txn Factor no Conserved 108222527
chr16 88557964 88557968 H4TF2 TRANSFAC yes 12290401
chr16 88557964 88557968 H4TF2 TRANSFAC yes 49417805
chr16 88557969 88557973 NFE TRANSFAC yes 12290402
chr16 88557969 88557973 NFE TRANSFAC yes 49417806
chr16 88557995 88558010 JUND JASPAR yes 12290403
chr16 88557995 88558010 JUND JASPAR yes 49417807
chr16 88557996 88558009 JUN JASPAR yes 12290404
chr16 88557996 88558009 JUN JASPAR yes 49417808
chr16 88558023 88558044 ZNF263 JASPAR yes 12290405
chr16 88558023 88558044 ZNF263 JASPAR yes 49417809
chr16 88558027 88558041 PLAG1 JASPAR yes 12290406
chr16 88558027 88558041 PLAG1 JASPAR yes 49417810
chr16 88558028 88558042 EBF1 JASPAR yes 12290407
chr16 88558028 88558042 EBF1 JASPAR yes 49417811
chr16 88558029 88558041 TFAP2A JASPAR yes 12290408
chr16 88558029 88558041 TFAP2B JASPAR yes 12290409
chr16 88558029 88558041 TFAP2C JASPAR yes 12290410
chr16 88558029 88558041 TFAP2A JASPAR yes 49417812
chr16 88558029 88558041 TFAP2B JASPAR yes 49417813
chr16 88558029 88558041 TFAP2C JASPAR yes 49417814
chr16 88558029 88558044 TFAP2A JASPAR yes 12290411
chr16 88558029 88558044 TFAP2C JASPAR yes 12290412
chr16 88558029 88558044 TFAP2A JASPAR yes 49417815
chr16 88558029 88558044 TFAP2C JASPAR yes 49417816
chr16 88558030 88558039 TFAP2A JASPAR yes 12290413
chr16 88558030 88558039 TFAP2A JASPAR yes 49417817
chr16 88558030 88558041 EBF1 JASPAR yes 12290414
chr16 88558030 88558041 EBF1 JASPAR yes 49417818
chr16 88558055 88558060 ETS2 TRANSFAC yes 12290415
chr16 88558055 88558060 ETS2 TRANSFAC yes 49417819
chr16 88558066 88558079 TFAP2B JASPAR yes 12290416
chr16 88558066 88558079 TFAP2B JASPAR yes 49417820
chr16 88558067 88558082 TFAP2A JASPAR yes 12290417
chr16 88558067 88558082 TFAP2C JASPAR yes 12290418
chr16 88558067 88558082 TFAP2A JASPAR yes 49417821
chr16 88558067 88558082 TFAP2C JASPAR yes 49417822
chr16 88558068 88558079 TFAP2A JASPAR yes 12290419
chr16 88558068 88558079 TFAP2B JASPAR yes 12290420
chr16 88558068 88558079 TFAP2A JASPAR yes 49417823
chr16 88558068 88558079 TFAP2B JASPAR yes 49417824
chr16 88558095 88558108 NFKB2 JASPAR yes 12290421
chr16 88558095 88558108 NFKB2 JASPAR yes 49417825
chr16 88558097 88558101 LFA1 TRANSFAC yes 12290422
chr16 88558097 88558101 LFA1 TRANSFAC yes 49417826
chr16 88558109 88558120 FLI1 JASPAR yes 12290423
chr16 88558109 88558120 FLI1 JASPAR yes 49417827
chr16 88558110 88558120 GABPA JASPAR yes 12290424
chr16 88558110 88558120 GABPA JASPAR yes 49417828
chr16 88558118 88558132 MTF1 JASPAR yes 12290425
chr16 88558118 88558132 MTF1 JASPAR yes 49417829
chr16 88558141 88558146 SP1 TRANSFAC yes 12290426
chr16 88558141 88558146 SP1 TRANSFAC yes 49417830
chr16 88558151 88558155 NFE TRANSFAC yes 12290427
chr16 88558151 88558155 NFE TRANSFAC yes 49417831
chr16 88558186 88558191 SP1 TRANSFAC yes 12290428
chr16 88558186 88558191 SP1 TRANSFAC yes 49417832
chr16 88558194 88558204 SREBF1 JASPAR yes 12290429
chr16 88558194 88558204 SREBF2 JASPAR yes 12290430
chr16 88558194 88558204 SREBF1 JASPAR yes 49417833
chr16 88558194 88558204 SREBF2 JASPAR yes 49417834
chr16 88558207 88558221 TLX1 JASPAR yes 12290431
chr16 88558207 88558221 TLX1 JASPAR yes 49417835
chr16 88558225 88558243 ESR1 JASPAR yes 12290432
chr16 88558225 88558243 ESR1 JASPAR yes 49417836
chr16 88558240 88558244 NFE TRANSFAC yes 12290433
chr16 88558240 88558244 NFE TRANSFAC yes 49417837
chr16 88558263 88558267 NFE TRANSFAC yes 12290434
chr16 88558263 88558267 NFE TRANSFAC yes 49417838
chr16 88558264 88558279 ZIC3 JASPAR yes 12290435
chr16 88558264 88558279 ZIC4 JASPAR yes 12290436
chr16 88558264 88558279 ZIC3 JASPAR yes 49417839
chr16 88558264 88558279 ZIC4 JASPAR yes 49417840
chr16 88558275 88558280 ETS2 TRANSFAC yes 12290437
chr16 88558275 88558280 ETS2 TRANSFAC yes 49417841
chr16 88558287 88558302 RUNX2 JASPAR yes 12290438
chr16 88558287 88558302 RUNX2 JASPAR yes 49417842
chr16 88558296 88558310 GATA2 JASPAR yes 12290439
chr16 88558296 88558310 GATA2 JASPAR yes 49417843
chr16 88558300 88558308 GATA5 JASPAR yes 12290440
chr16 88558300 88558308 GATA5 JASPAR yes 49417844
chr16 88558312 88558317 SP1 TRANSFAC yes 12290441
chr16 88558312 88558317 SP1 TRANSFAC yes 49417845
chr16 88558328 88558334 YY1 JASPAR yes 12290442
chr16 88558328 88558334 YY1 JASPAR yes 49417846
chr16 88558337 88558357 PPARG JASPAR yes 12290443
chr16 88558337 88558357 PPARG JASPAR yes 49417847
chr16 88558340 88558344 ESR1 TRANSFAC yes 12290444
chr16 88558340 88558344 ESR1 TRANSFAC yes 49417848
chr16 88558347 88558360 TFAP2A JASPAR yes 12290445
chr16 88558347 88558360 TFAP2B JASPAR yes 12290446
chr16 88558347 88558360 TFAP2C JASPAR yes 12290447
chr16 88558347 88558360 TFAP2A JASPAR yes 49417849
chr16 88558347 88558360 TFAP2B JASPAR yes 49417850
chr16 88558347 88558360 TFAP2C JASPAR yes 49417851
chr16 88558348 88558359 EBF1 JASPAR yes 12290448
chr16 88558348 88558359 EBF1 JASPAR yes 49417852
chr16 88558351 88558362 ESRRA JASPAR yes 12290449
chr16 88558351 88558362 ESRRA JASPAR yes 49417853
chr16 88558355 88558359 LFA1 TRANSFAC yes 12290450
chr16 88558355 88558359 LFA1 TRANSFAC yes 49417854
chr16 88558360 88558369 HIC2 JASPAR yes 12290451
chr16 88558360 88558369 HIC2 JASPAR yes 49417855
chr16 88558367 88558378 USF1 JASPAR yes 12290452
chr16 88558367 88558378 USF2 JASPAR yes 12290453
chr16 88558367 88558378 USF1 JASPAR yes 49417856
chr16 88558367 88558378 USF2 JASPAR yes 49417857
chr16 88558378 88558382 H4TF2 TRANSFAC yes 12290454
chr16 88558378 88558382 H4TF2 TRANSFAC yes 49417858
chr16 88558381 88558396 RFX5 JASPAR yes 12290455
chr16 88558381 88558396 RFX5 JASPAR yes 49417859
chr16 88558391 88558395 LFA1 TRANSFAC yes 12290456
chr16 88558391 88558395 LFA1 TRANSFAC yes 49417860
chr16 88558393 88558408 ZIC3 JASPAR yes 12290457
chr16 88558393 88558408 ZIC4 JASPAR yes 12290458
chr16 88558393 88558408 ZIC3 JASPAR yes 49417861
chr16 88558393 88558408 ZIC4 JASPAR yes 49417862
chr16 88558394 88558408 ZIC1 JASPAR yes 12290459
chr16 88558394 88558408 ZIC1 JASPAR yes 49417863
chr16 88558413 88558417 YY1 TRANSFAC yes 12290460
chr16 88558413 88558417 YY1 TRANSFAC yes 49417864
SNP sites on vista23502[chr16:88557943-88558427]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88557962 rs80348840 A T
GATA1 POLR2A
4664239
chr16 88557977 rs371406842 T C
GATA1 POLR2A
4664240
chr16 88558040 rs113185051 G C
CCNT2 EBF1 GATA1 HMGN3 PLAG1 POLR2A RCOR1 TEAD4 TFAP2A TFAP2B TFAP2C ZNF263
4664241
chr16 88558042 rs189382207 T A
CCNT2 EBF1 GATA1 HMGN3 POLR2A RCOR1 TEAD4 TFAP2A TFAP2C ZNF263
4664242
chr16 88558089 rs112007391 T A
CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 NR2F2 PML POLR2A RCOR1 TAL1 TEAD4
4664243
chr16 88558164 rs17175830 G A,T
CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 NR2F2 PML POLR2A RCOR1 STAT5A TAL1 TEAD4 TRIM28
4664244
chr16 88558172 rs11863449 G A
CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 NR2F2 PML POLR2A RCOR1 STAT5A TAL1 TEAD4 TRIM28
4664245
chr16 88558233 rs17700747 G A
BHLHE40 CCNT2 EGR1 EP300 ESR1 GATA1 GATA2 HMGN3 NR2F2 PML POLR2A RCOR1 STAT5A TAL1 TEAD4 TRIM28
4664246
chr16 88558237 rs376781025 C T
BHLHE40 CCNT2 EGR1 EP300 ESR1 GATA1 GATA2 HMGN3 NR2F2 PML POLR2A RCOR1 STAT5A TAL1 TEAD4 TRIM28
4664247
chr16 88558312 rs59865663 G A
BHLHE40 CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 NR2F2 PML POLR2A RCOR1 SP1 STAT5A TAL1 TEAD4 TRIM28
4664248
chr16 88558314 rs373326975 G A
BHLHE40 CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 NR2F2 PML POLR2A RCOR1 SP1 STAT5A TAL1 TEAD4 TRIM28
4664249
chr16 88558354 rs74032902 A C
BHLHE40 CCNT2 EBF1 EP300 ESRRA GATA1 GATA2 HMGN3 NR2F2 PML POLR2A PPARG STAT5A TAL1 TEAD4 TFAP2A TFAP2B TFAP2C
4664250
Genes possibly regulated by vista23502[chr16:88557943-88558427]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88493879 88507165 + ZNF469 ENSG00000225614.2 88493879 0.85 1.0 15153 35936
chr16 88519725 88603424 + ZFPM1 ENSG00000179588.4 88519725 0.71 1.0 15154 61782
chr16 88636789 88698374 + ZC3H18 ENSG00000158545.11 88636789 0.61 0.99 15155 21638
Expression level of Genes
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miRNAs possibly regulated by vista23502[chr16:88557943-88558427]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results