EnhancerDB
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  3. rs80348840[chr16:88557962]
Enhancers that have rs80348840[chr16:88557962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88556185 88579980 enh52393
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Pancreas Heart
chr16 88557943 88558427 vista23502
VISTA
Transcript factors that have rs80348840[chr16:88557962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88557284 88558193 ZNF143 GTRD no Epithelial (MCF-7) 21736564
chr16 88557284 88558193 ZNF143 GTRD no Epithelial (MCF-7) 108222464
chr16 88557494 88557998 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736565
chr16 88557494 88557998 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222465
chr16 88557779 88559742 TCF7L2 GTRD no Colon (HCT116) 21736566
chr16 88557779 88559742 TCF7L2 GTRD no Colon (HCT116) 108222466
chr16 88557782 88558666 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736567
chr16 88557782 88558666 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222467
chr16 88557806 88558286 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736568
chr16 88557806 88558286 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222468
chr16 88557853 88558293 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736569
chr16 88557853 88558293 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222469
chr16 88557869 88558475 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736570
chr16 88557869 88558475 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222470
chr16 88557888 88558245 ZNF143 GTRD no Epithelial (MCF-7) 21736571
chr16 88557888 88558245 ZNF143 GTRD no Epithelial (MCF-7) 108222471
chr16 88557910 88558346 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736572
chr16 88557910 88558346 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222472
chr16 88557911 88558629 GATA1 UCSC Txn Factor no Conserved 108222473
chr16 88557926 88558486 POLR2A UCSC Txn Factor no Conserved 108222474
chr16 88557936 88558392 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736573
chr16 88557936 88558392 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222475
Genes associated with rs80348840[chr16:88557962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More