EnhancerDB
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  3. vista23511[chr16:88826966-88827318]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23511[chr16:88826966-88827318]
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Tissue distribution of vista23511
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Transcription factor that possibly regulate vista23511[chr16:88826966-88827318]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88825532 88829851 POLR2A UCSC Txn Factor no Conserved 108223304
chr16 88826892 88827420 E2F1 UCSC Txn Factor no Conserved 108223318
chr16 88826988 88827001 TFAP2B JASPAR yes 12300822
chr16 88826988 88827001 TFAP2C JASPAR yes 12300823
chr16 88826988 88827001 TFAP2B JASPAR yes 49418357
chr16 88826988 88827001 TFAP2C JASPAR yes 49418358
chr16 88826992 88827012 PPARG JASPAR yes 12300824
chr16 88826992 88827012 PPARG JASPAR yes 49418359
chr16 88827028 88827043 TFAP2A JASPAR yes 12300825
chr16 88827028 88827043 TFAP2A JASPAR yes 49418360
chr16 88827029 88827034 SP1 TRANSFAC yes 12300826
chr16 88827029 88827034 SP1 TRANSFAC yes 49418361
chr16 88827029 88827043 PLAG1 JASPAR yes 12300827
chr16 88827029 88827043 PLAG1 JASPAR yes 49418362
chr16 88827031 88827043 TFAP2A JASPAR yes 12300828
chr16 88827031 88827043 TFAP2B JASPAR yes 12300829
chr16 88827031 88827043 TFAP2A JASPAR yes 49418363
chr16 88827031 88827043 TFAP2B JASPAR yes 49418364
chr16 88827032 88827041 TFAP2A JASPAR yes 12300830
chr16 88827032 88827041 TFAP2A JASPAR yes 49418365
chr16 88827037 88827050 NFKB1 JASPAR yes 12300831
chr16 88827037 88827050 NFKB1 JASPAR yes 49418366
chr16 88827066 88827079 ELF1 JASPAR yes 12300832
chr16 88827066 88827079 ELF1 JASPAR yes 49418367
chr16 88827066 88827082 ZNF143 JASPAR yes 12300833
chr16 88827066 88827082 ZNF143 JASPAR yes 49418368
chr16 88827069 88827076 ETS1 TRANSFAC yes 12300834
chr16 88827069 88827076 ETS1 TRANSFAC yes 49418369
chr16 88827090 88827104 PLAG1 JASPAR yes 12300835
chr16 88827090 88827104 PLAG1 JASPAR yes 49418370
chr16 88827091 88827095 H4TF2 TRANSFAC yes 12300836
chr16 88827091 88827095 H4TF2 TRANSFAC yes 49418371
chr16 88827128 88827139 EBF1 JASPAR yes 12300837
chr16 88827128 88827139 EBF1 JASPAR yes 49418372
chr16 88827134 88827139 SP1 TRANSFAC yes 12300838
chr16 88827134 88827139 SP1 TRANSFAC yes 49418373
chr16 88827150 88827165 TFAP2A JASPAR yes 12300839
chr16 88827150 88827165 TFAP2A JASPAR yes 49418374
chr16 88827151 88827156 SP1 TRANSFAC yes 12300840
chr16 88827151 88827156 SP1 TRANSFAC yes 49418375
chr16 88827151 88827165 PLAG1 JASPAR yes 12300841
chr16 88827151 88827165 PLAG1 JASPAR yes 49418376
chr16 88827153 88827165 TFAP2A JASPAR yes 12300842
chr16 88827153 88827165 TFAP2B JASPAR yes 12300843
chr16 88827153 88827165 TFAP2A JASPAR yes 49418377
chr16 88827153 88827165 TFAP2B JASPAR yes 49418378
chr16 88827154 88827163 TFAP2A JASPAR yes 12300844
chr16 88827154 88827163 TFAP2A JASPAR yes 49418379
chr16 88827159 88827172 NFKB1 JASPAR yes 12300845
chr16 88827159 88827172 NFKB1 JASPAR yes 49418380
chr16 88827179 88827194 ZIC3 JASPAR yes 12300846
chr16 88827179 88827194 ZIC4 JASPAR yes 12300847
chr16 88827179 88827194 ZIC3 JASPAR yes 49418381
chr16 88827179 88827194 ZIC4 JASPAR yes 49418382
chr16 88827180 88827194 ZIC1 JASPAR yes 12300848
chr16 88827180 88827194 ZIC1 JASPAR yes 49418383
chr16 88827195 88827205 TEAD1 JASPAR yes 12300849
chr16 88827195 88827205 TEAD4 JASPAR yes 12300850
chr16 88827195 88827205 TEAD1 JASPAR yes 49418384
chr16 88827195 88827205 TEAD4 JASPAR yes 49418385
chr16 88827196 88827204 TEAD3 JASPAR yes 12300851
chr16 88827196 88827204 TEAD3 JASPAR yes 49418386
chr16 88827215 88827229 TLX1 JASPAR yes 12300852
chr16 88827215 88827229 TLX1 JASPAR yes 49418387
chr16 88827230 88827245 TFAP2C JASPAR yes 12300853
chr16 88827230 88827245 TFAP2C JASPAR yes 49418388
chr16 88827231 88827242 TFAP2A JASPAR yes 12300854
chr16 88827231 88827242 TFAP2B JASPAR yes 12300855
chr16 88827231 88827242 TFAP2C JASPAR yes 12300856
chr16 88827231 88827242 TFAP2A JASPAR yes 49418389
chr16 88827231 88827242 TFAP2B JASPAR yes 49418390
chr16 88827231 88827242 TFAP2C JASPAR yes 49418391
chr16 88827232 88827241 TFAP2A JASPAR yes 12300857
chr16 88827232 88827241 TFAP2A JASPAR yes 49418392
chr16 88827237 88827241 LFA1 TRANSFAC yes 12300858
chr16 88827237 88827241 LFA1 TRANSFAC yes 49418393
chr16 88827245 88827260 HSF1 JASPAR yes 12300859
chr16 88827245 88827260 HSF1 JASPAR yes 49418394
chr16 88827257 88827267 BARHL2 JASPAR yes 12300860
chr16 88827257 88827267 BARHL2 JASPAR yes 49418395
chr16 88827259 88827263 YY1 TRANSFAC yes 12300861
chr16 88827259 88827263 YY1 TRANSFAC yes 49418396
chr16 88827260 88827270 HOXD13 JASPAR yes 12300862
chr16 88827260 88827270 HOXD13 JASPAR yes 49418397
chr16 88827261 88827271 ALX3 JASPAR yes 12300863
chr16 88827261 88827271 EMX1 JASPAR yes 12300864
chr16 88827261 88827271 EMX2 JASPAR yes 12300865
chr16 88827261 88827271 ESX1 JASPAR yes 12300866
chr16 88827261 88827271 GBX2 JASPAR yes 12300867
chr16 88827261 88827271 GSX1 JASPAR yes 12300868
chr16 88827261 88827271 GSX2 JASPAR yes 12300869
chr16 88827261 88827271 HESX1 JASPAR yes 12300870
chr16 88827261 88827271 HOXB2 JASPAR yes 12300871
chr16 88827261 88827271 HOXB3 JASPAR yes 12300872
chr16 88827261 88827271 LBX2 JASPAR yes 12300873
chr16 88827261 88827271 LHX2 JASPAR yes 12300874
chr16 88827261 88827271 LHX6 JASPAR yes 12300875
chr16 88827261 88827271 MEOX1 JASPAR yes 12300876
chr16 88827261 88827271 MEOX2 JASPAR yes 12300877
chr16 88827261 88827271 MIXL1 JASPAR yes 12300878
chr16 88827261 88827271 MNX1 JASPAR yes 12300879
chr16 88827261 88827271 NOTO JASPAR yes 12300880
chr16 88827261 88827271 RAX JASPAR yes 12300881
chr16 88827261 88827271 ALX3 JASPAR yes 49418398
chr16 88827261 88827271 EMX1 JASPAR yes 49418399
chr16 88827261 88827271 EMX2 JASPAR yes 49418400
chr16 88827261 88827271 ESX1 JASPAR yes 49418401
chr16 88827261 88827271 GBX2 JASPAR yes 49418402
chr16 88827261 88827271 GSX1 JASPAR yes 49418403
chr16 88827261 88827271 GSX2 JASPAR yes 49418404
chr16 88827261 88827271 HESX1 JASPAR yes 49418405
chr16 88827261 88827271 HOXB2 JASPAR yes 49418406
chr16 88827261 88827271 HOXB3 JASPAR yes 49418407
chr16 88827261 88827271 LBX2 JASPAR yes 49418408
chr16 88827261 88827271 LHX2 JASPAR yes 49418409
chr16 88827261 88827271 LHX6 JASPAR yes 49418410
chr16 88827261 88827271 MEOX1 JASPAR yes 49418411
chr16 88827261 88827271 MEOX2 JASPAR yes 49418412
chr16 88827261 88827271 MIXL1 JASPAR yes 49418413
chr16 88827261 88827271 MNX1 JASPAR yes 49418414
chr16 88827261 88827271 NOTO JASPAR yes 49418415
chr16 88827261 88827271 RAX JASPAR yes 49418416
chr16 88827262 88827270 BSX JASPAR yes 12300882
chr16 88827262 88827270 DLX6 JASPAR yes 12300883
chr16 88827262 88827270 EN1 JASPAR yes 12300884
chr16 88827262 88827270 ISX JASPAR yes 12300885
chr16 88827262 88827270 LBX1 JASPAR yes 12300886
chr16 88827262 88827270 LHX9 JASPAR yes 12300887
chr16 88827262 88827270 LMX1A JASPAR yes 12300888
chr16 88827262 88827270 LMX1B JASPAR yes 12300889
chr16 88827262 88827270 NKX6-1 JASPAR yes 12300890
chr16 88827262 88827270 NKX6-2 JASPAR yes 12300891
chr16 88827262 88827270 PAX4 JASPAR yes 12300892
chr16 88827262 88827270 PDX1 JASPAR yes 12300893
chr16 88827262 88827270 PRRX1 JASPAR yes 12300894
chr16 88827262 88827270 RAX2 JASPAR yes 12300895
chr16 88827262 88827270 SHOX JASPAR yes 12300896
chr16 88827262 88827270 UNCX JASPAR yes 12300897
chr16 88827262 88827270 VAX1 JASPAR yes 12300898
chr16 88827262 88827270 VAX2 JASPAR yes 12300899
chr16 88827262 88827270 VSX1 JASPAR yes 12300900
chr16 88827262 88827270 VSX2 JASPAR yes 12300901
chr16 88827262 88827270 BSX JASPAR yes 49418417
chr16 88827262 88827270 DLX6 JASPAR yes 49418418
chr16 88827262 88827270 EN1 JASPAR yes 49418419
chr16 88827262 88827270 ISX JASPAR yes 49418420
chr16 88827262 88827270 LBX1 JASPAR yes 49418421
chr16 88827262 88827270 LHX9 JASPAR yes 49418422
chr16 88827262 88827270 LMX1A JASPAR yes 49418423
chr16 88827262 88827270 LMX1B JASPAR yes 49418424
chr16 88827262 88827270 NKX6-1 JASPAR yes 49418425
chr16 88827262 88827270 NKX6-2 JASPAR yes 49418426
chr16 88827262 88827270 PAX4 JASPAR yes 49418427
chr16 88827262 88827270 PDX1 JASPAR yes 49418428
chr16 88827262 88827270 PRRX1 JASPAR yes 49418429
chr16 88827262 88827270 RAX2 JASPAR yes 49418430
chr16 88827262 88827270 SHOX JASPAR yes 49418431
chr16 88827262 88827270 UNCX JASPAR yes 49418432
chr16 88827262 88827270 VAX1 JASPAR yes 49418433
chr16 88827262 88827270 VAX2 JASPAR yes 49418434
chr16 88827262 88827270 VSX1 JASPAR yes 49418435
chr16 88827262 88827270 VSX2 JASPAR yes 49418436
chr16 88827262 88827272 POU6F2 JASPAR yes 12300902
chr16 88827262 88827272 POU6F2 JASPAR yes 49418437
chr16 88827282 88827292 HOXB13 JASPAR yes 12300903
chr16 88827282 88827292 HOXD13 JASPAR yes 12300904
chr16 88827282 88827292 HOXB13 JASPAR yes 49418438
chr16 88827282 88827292 HOXD13 JASPAR yes 49418439
chr16 88827282 88827293 HOXA10 JASPAR yes 12300905
chr16 88827282 88827293 HOXA10 JASPAR yes 49418440
chr16 88827283 88827293 ALX3 JASPAR yes 12300906
chr16 88827283 88827293 EMX1 JASPAR yes 12300907
chr16 88827283 88827293 EMX2 JASPAR yes 12300908
chr16 88827283 88827293 ESX1 JASPAR yes 12300909
chr16 88827283 88827293 GBX2 JASPAR yes 12300910
chr16 88827283 88827293 GSX1 JASPAR yes 12300911
chr16 88827283 88827293 GSX2 JASPAR yes 12300912
chr16 88827283 88827293 HESX1 JASPAR yes 12300913
chr16 88827283 88827293 HOXB2 JASPAR yes 12300914
chr16 88827283 88827293 HOXB3 JASPAR yes 12300915
chr16 88827283 88827293 LBX2 JASPAR yes 12300916
chr16 88827283 88827293 LHX2 JASPAR yes 12300917
chr16 88827283 88827293 LHX6 JASPAR yes 12300918
chr16 88827283 88827293 MEOX1 JASPAR yes 12300919
chr16 88827283 88827293 MEOX2 JASPAR yes 12300920
chr16 88827283 88827293 MIXL1 JASPAR yes 12300921
chr16 88827283 88827293 MNX1 JASPAR yes 12300922
chr16 88827283 88827293 NOTO JASPAR yes 12300923
chr16 88827283 88827293 RAX JASPAR yes 12300924
chr16 88827283 88827293 ALX3 JASPAR yes 49418441
chr16 88827283 88827293 EMX1 JASPAR yes 49418442
chr16 88827283 88827293 EMX2 JASPAR yes 49418443
chr16 88827283 88827293 ESX1 JASPAR yes 49418444
chr16 88827283 88827293 GBX2 JASPAR yes 49418445
chr16 88827283 88827293 GSX1 JASPAR yes 49418446
chr16 88827283 88827293 GSX2 JASPAR yes 49418447
chr16 88827283 88827293 HESX1 JASPAR yes 49418448
chr16 88827283 88827293 HOXB2 JASPAR yes 49418449
chr16 88827283 88827293 HOXB3 JASPAR yes 49418450
chr16 88827283 88827293 LBX2 JASPAR yes 49418451
chr16 88827283 88827293 LHX2 JASPAR yes 49418452
chr16 88827283 88827293 LHX6 JASPAR yes 49418453
chr16 88827283 88827293 MEOX1 JASPAR yes 49418454
chr16 88827283 88827293 MEOX2 JASPAR yes 49418455
chr16 88827283 88827293 MIXL1 JASPAR yes 49418456
chr16 88827283 88827293 MNX1 JASPAR yes 49418457
chr16 88827283 88827293 NOTO JASPAR yes 49418458
chr16 88827283 88827293 RAX JASPAR yes 49418459
chr16 88827283 88827297 RORA JASPAR yes 12300925
chr16 88827283 88827297 RORA JASPAR yes 49418460
chr16 88827284 88827292 BSX JASPAR yes 12300926
chr16 88827284 88827292 DLX6 JASPAR yes 12300927
chr16 88827284 88827292 EN1 JASPAR yes 12300928
chr16 88827284 88827292 ISX JASPAR yes 12300929
chr16 88827284 88827292 LBX1 JASPAR yes 12300930
chr16 88827284 88827292 LHX9 JASPAR yes 12300931
chr16 88827284 88827292 LMX1A JASPAR yes 12300932
chr16 88827284 88827292 LMX1B JASPAR yes 12300933
chr16 88827284 88827292 NKX6-1 JASPAR yes 12300934
chr16 88827284 88827292 NKX6-2 JASPAR yes 12300935
chr16 88827284 88827292 PAX4 JASPAR yes 12300936
chr16 88827284 88827292 PDX1 JASPAR yes 12300937
chr16 88827284 88827292 PRRX1 JASPAR yes 12300938
chr16 88827284 88827292 RAX2 JASPAR yes 12300939
chr16 88827284 88827292 SHOX JASPAR yes 12300940
chr16 88827284 88827292 UNCX JASPAR yes 12300941
chr16 88827284 88827292 VAX1 JASPAR yes 12300942
chr16 88827284 88827292 VAX2 JASPAR yes 12300943
chr16 88827284 88827292 VSX1 JASPAR yes 12300944
chr16 88827284 88827292 VSX2 JASPAR yes 12300945
chr16 88827284 88827292 BSX JASPAR yes 49418461
chr16 88827284 88827292 DLX6 JASPAR yes 49418462
chr16 88827284 88827292 EN1 JASPAR yes 49418463
chr16 88827284 88827292 ISX JASPAR yes 49418464
chr16 88827284 88827292 LBX1 JASPAR yes 49418465
chr16 88827284 88827292 LHX9 JASPAR yes 49418466
chr16 88827284 88827292 LMX1A JASPAR yes 49418467
chr16 88827284 88827292 LMX1B JASPAR yes 49418468
chr16 88827284 88827292 NKX6-1 JASPAR yes 49418469
chr16 88827284 88827292 NKX6-2 JASPAR yes 49418470
chr16 88827284 88827292 PAX4 JASPAR yes 49418471
chr16 88827284 88827292 PDX1 JASPAR yes 49418472
chr16 88827284 88827292 PRRX1 JASPAR yes 49418473
chr16 88827284 88827292 RAX2 JASPAR yes 49418474
chr16 88827284 88827292 SHOX JASPAR yes 49418475
chr16 88827284 88827292 UNCX JASPAR yes 49418476
chr16 88827284 88827292 VAX1 JASPAR yes 49418477
chr16 88827284 88827292 VAX2 JASPAR yes 49418478
chr16 88827284 88827292 VSX1 JASPAR yes 49418479
chr16 88827284 88827292 VSX2 JASPAR yes 49418480
chr16 88827284 88827294 POU6F2 JASPAR yes 12300946
chr16 88827284 88827294 POU6F2 JASPAR yes 49418481
chr16 88827284 88827297 DUXA JASPAR yes 12300947
chr16 88827284 88827297 DUXA JASPAR yes 49418482
chr16 88827303 88827313 RELA JASPAR yes 12300948
chr16 88827303 88827313 RELA JASPAR yes 49418483
chr16 88827312 88827322 HOXA13 JASPAR yes 12300949
chr16 88827312 88827322 HOXB13 JASPAR yes 12300950
chr16 88827312 88827322 HOXD13 JASPAR yes 12300951
chr16 88827312 88827322 HOXA13 JASPAR yes 49418484
chr16 88827312 88827322 HOXB13 JASPAR yes 49418485
chr16 88827312 88827322 HOXD13 JASPAR yes 49418486
chr16 88827312 88827323 HOXA10 JASPAR yes 12300952
chr16 88827312 88827323 HOXD12 JASPAR yes 12300953
chr16 88827312 88827323 HOXA10 JASPAR yes 49418487
chr16 88827312 88827323 HOXD12 JASPAR yes 49418488
chr16 88827313 88827322 CDX1 JASPAR yes 12300954
chr16 88827313 88827322 CDX1 JASPAR yes 49418489
chr16 88827313 88827324 CDX2 JASPAR yes 12300955
chr16 88827313 88827324 CDX2 JASPAR yes 49418490
SNP sites on vista23511[chr16:88826966-88827318]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88826975 rs143819596 C T
E2F1 POLR2A
4667596
chr16 88826990 rs148155588 G A,T
E2F1 POLR2A TFAP2B TFAP2C
4667597
chr16 88827032 rs376031904 G C
E2F1 PLAG1 POLR2A SP1 TFAP2A TFAP2B
4667598
chr16 88827036 rs573684877 C T
E2F1 PLAG1 POLR2A TFAP2A TFAP2B
4667599
chr16 88827050 rs548735943 C T
E2F1 NFKB1 POLR2A
4667600
chr16 88827074 rs11644992 G C
E2F1 ELF1 ETS1 POLR2A ZNF143
4667601
chr16 88827124 rs534245416 G A
E2F1 POLR2A
4667602
chr16 88827169 rs28642110 A G
E2F1 NFKB1 POLR2A
4667603
chr16 88827172 rs28494875 C T
E2F1 NFKB1 POLR2A
4667604
chr16 88827209 rs17666981 C T
E2F1 POLR2A
4667605
chr16 88827245 rs78777782 G A
E2F1 HSF1 POLR2A TFAP2C
4667606
chr16 88827246 rs114896324 A T
E2F1 HSF1 POLR2A
4667607
Genes possibly regulated by vista23511[chr16:88826966-88827318]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88718343 88729569 - MVD ENSG00000167508.6 88729569 0.65 1.0 15158 2603
chr16 88744090 88752901 - SNAI3 ENSG00000185669.5 88752901 0.89 1.0 15159 25935
chr16 88762903 88772829 - RNF166 ENSG00000158717.6 88772829 0.81 1.0 15160 45863
chr16 88772871 88781794 + CTU2 ENSG00000174177.8 88772871 0.72 1.0 15161 45905
chr16 88781751 88851619 - PIEZO1 ENSG00000103335.15 88851619 0.67 1.0 15162 75699
chr16 88869621 88875666 + CDT1 ENSG00000167513.4 88869621 0.97 1.0 15163 57697
chr16 88875747 88878352 - APRT ENSG00000198931.6 88878352 0.75 1.0 15164 48966
chr16 88880142 88923378 - GALNS ENSG00000141012.8 88923378 0.67 1.0 15165 3940
chr16 88894366 88894545 + AC092384.1 ENSG00000269422.1 88894366 0.0 1.0 15166 32952
chr16 88922628 88929094 + TRAPPC2L ENSG00000167515.6 88922628 0.83 1.0 15167 4690
Expression level of Genes
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miRNAs possibly regulated by vista23511[chr16:88826966-88827318]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 88782686 88782707 - hsa-miR-4722-3p MIMAT0019837 88851627 0.005234527352971364 0.916667 0.0 641
Expression level of miRNAs
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