EnhancerDB
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  3. vista23520[chr16:88848168-88848452]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23520[chr16:88848168-88848452]
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Tissue distribution of vista23520
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Transcription factor that possibly regulate vista23520[chr16:88848168-88848452]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88847410 88848589 MYC UCSC Txn Factor no Conserved 108223701
chr16 88847410 88848589 MYC UCSC Txn Factor no Conserved 108223702
chr16 88848131 88848567 MAX UCSC Txn Factor no Conserved 108223742
chr16 88848178 88848184 MZF1 JASPAR yes 12303906
chr16 88848178 88848184 MZF1 JASPAR yes 49418915
chr16 88848260 88848270 BARHL2 JASPAR yes 12303907
chr16 88848260 88848270 BARHL2 JASPAR yes 49418916
chr16 88848269 88848281 TGIF1 JASPAR yes 12303908
chr16 88848269 88848281 TGIF2 JASPAR yes 12303909
chr16 88848269 88848281 TGIF1 JASPAR yes 49418917
chr16 88848269 88848281 TGIF2 JASPAR yes 49418918
chr16 88848289 88848308 CTCF JASPAR yes 12303910
chr16 88848289 88848308 CTCF JASPAR yes 49418919
chr16 88848305 88848310 SP1 TRANSFAC yes 12303911
chr16 88848305 88848310 SP1 TRANSFAC yes 49418920
chr16 88848324 88848337 NFKB2 JASPAR yes 12303912
chr16 88848324 88848337 NFKB2 JASPAR yes 49418921
chr16 88848330 88848342 TFAP2A JASPAR yes 12303913
chr16 88848330 88848342 TFAP2B JASPAR yes 12303914
chr16 88848330 88848342 TFAP2C JASPAR yes 12303915
chr16 88848330 88848342 TFAP2A JASPAR yes 49418922
chr16 88848330 88848342 TFAP2B JASPAR yes 49418923
chr16 88848330 88848342 TFAP2C JASPAR yes 49418924
chr16 88848330 88848345 TFAP2A JASPAR yes 12303916
chr16 88848330 88848345 TFAP2A JASPAR yes 49418925
chr16 88848359 88848373 SPI1 JASPAR yes 12303917
chr16 88848359 88848373 SPI1 JASPAR yes 49418926
chr16 88848367 88848379 YY1 JASPAR yes 12303918
chr16 88848367 88848379 YY1 JASPAR yes 49418927
chr16 88848370 88848380 OLIG2 JASPAR yes 12303919
chr16 88848370 88848380 OLIG3 JASPAR yes 12303920
chr16 88848370 88848380 OLIG2 JASPAR yes 49418928
chr16 88848370 88848380 OLIG3 JASPAR yes 49418929
chr16 88848378 88848388 SREBF1 JASPAR yes 12303921
chr16 88848378 88848388 SREBF2 JASPAR yes 12303922
chr16 88848378 88848388 SREBF1 JASPAR yes 49418930
chr16 88848378 88848388 SREBF2 JASPAR yes 49418931
chr16 88848382 88848392 MAX JASPAR yes 12303923
chr16 88848382 88848392 MAX JASPAR yes 49418932
chr16 88848384 88848391 USF1 JASPAR yes 12303924
chr16 88848384 88848391 USF1 JASPAR yes 49418933
chr16 88848384 88848394 MAX JASPAR yes 12303925
chr16 88848384 88848394 MAX JASPAR yes 49418934
chr16 88848385 88848390 MYC TRANSFAC yes 12303926
chr16 88848385 88848390 USF1 TRANSFAC yes 12303927
chr16 88848385 88848390 USF2 TRANSFAC yes 12303928
chr16 88848385 88848390 MYC TRANSFAC yes 49418935
chr16 88848385 88848390 USF1 TRANSFAC yes 49418936
chr16 88848385 88848390 USF2 TRANSFAC yes 49418937
chr16 88848385 88848392 USF1 JASPAR yes 12303929
chr16 88848385 88848392 USF1 JASPAR yes 49418938
chr16 88848426 88848438 TAL1 JASPAR yes 12303930
chr16 88848426 88848438 TAL1 JASPAR yes 49418939
chr16 88848428 88848438 MSC JASPAR yes 12303931
chr16 88848428 88848438 TFAP4 JASPAR yes 12303932
chr16 88848428 88848438 MSC JASPAR yes 49418940
chr16 88848428 88848438 TFAP4 JASPAR yes 49418941
chr16 88848428 88848440 TAL1 JASPAR yes 12303933
chr16 88848428 88848440 TAL1 JASPAR yes 49418942
chr16 88848433 88848443 RELA JASPAR yes 12303934
chr16 88848433 88848443 RELA JASPAR yes 49418943
chr16 88848438 88848444 ETS1 JASPAR yes 12303935
chr16 88848438 88848444 ETS1 JASPAR yes 49418944
chr16 88848449 88848453 NFE TRANSFAC yes 12303936
chr16 88848449 88848453 NFE TRANSFAC yes 49418945
chr16 88848450 88848460 SMAD3 JASPAR yes 12303937
chr16 88848450 88848460 SMAD3 JASPAR yes 49418946
SNP sites on vista23520[chr16:88848168-88848452]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88848279 rs16964987 T G
MAX MYC TGIF1 TGIF2
4668055
chr16 88848320 rs556418387 G A
MAX MYC
4668056
chr16 88848324 rs541958528 G A
MAX MYC NFKB2
4668057
chr16 88848330 rs116499404 G A
MAX MYC NFKB2 TFAP2A TFAP2B TFAP2C
4668058
chr16 88848339 rs187439054 G T
MAX MYC TFAP2A TFAP2B TFAP2C
4668059
chr16 88848351 rs139650268 AG A
MAX MYC
4668060
chr16 88848433 rs544040 G A
MAX MSC MYC RELA TAL1 TFAP4
4668061
Genes possibly regulated by vista23520[chr16:88848168-88848452]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88744090 88752901 - SNAI3 ENSG00000185669.5 88752901 0.89 1.0 15159 4733
chr16 88762903 88772829 - RNF166 ENSG00000158717.6 88772829 0.81 1.0 15160 24661
chr16 88772871 88781794 + CTU2 ENSG00000174177.8 88772871 0.72 1.0 15161 24703
chr16 88781751 88851619 - PIEZO1 ENSG00000103335.15 88851619 0.67 1.0 15162 96833
chr16 88869621 88875666 + CDT1 ENSG00000167513.4 88869621 0.97 1.0 15163 78831
chr16 88875747 88878352 - APRT ENSG00000198931.6 88878352 0.75 1.0 15164 70100
chr16 88880142 88923378 - GALNS ENSG00000141012.8 88923378 0.67 1.0 15165 25074
chr16 88894366 88894545 + AC092384.1 ENSG00000269422.1 88894366 0.0 1.0 15166 54086
chr16 88922628 88929094 + TRAPPC2L ENSG00000167515.6 88922628 0.83 1.0 15167 25824
chr16 88928034 88933068 - PABPN1L ENSG00000205022.5 88933068 0.89 1.0 15168 15384
Expression level of Genes
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miRNAs possibly regulated by vista23520[chr16:88848168-88848452]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 88782686 88782707 - hsa-miR-4722-3p MIMAT0019837 88851627 0.039974917698698854 0.916667 0.0 641
Expression level of miRNAs
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