EnhancerDB
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Enhancers that have rs544040[chr16:88848433]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr16 88848168 88848452 vista23520
VISTA
Transcript factors that have rs544040[chr16:88848433]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 21737173
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223690
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223691
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223692
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 21737175
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 108223694
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 108223695
chr16 88847410 88848589 MYC UCSC Txn Factor no Conserved 108223701
chr16 88847410 88848589 MYC UCSC Txn Factor no Conserved 108223702
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 21737182
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223705
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223706
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223707
chr16 88847549 88848509 ZNF143 GTRD no Epithelial (MCF-7) 21737190
chr16 88847549 88848509 ZNF143 GTRD no Epithelial (MCF-7) 108223715
chr16 88847549 88848509 ZNF143 GTRD no Epithelial (MCF-7) 108223716
chr16 88847989 88848589 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737210
chr16 88847989 88848589 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223740
chr16 88848086 88848596 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737211
chr16 88848086 88848596 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223741
chr16 88848131 88848567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737212
chr16 88848131 88848567 MAX UCSC Txn Factor no Conserved 108223742
chr16 88848131 88848567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223743
chr16 88848132 88848568 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737213
chr16 88848132 88848568 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223744
chr16 88848149 88848555 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737214
chr16 88848149 88848555 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223745
chr16 88848153 88849152 TCF7L2 GTRD no Colon (HCT116) 21737215
chr16 88848153 88849152 TCF7L2 GTRD no Colon (HCT116) 108223746
chr16 88848153 88849152 TCF7L2 GTRD no Colon (HCT116) 108223747
chr16 88848161 88848485 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737216
chr16 88848161 88848485 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223748
chr16 88848185 88848575 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737217
chr16 88848185 88848575 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223749
chr16 88848191 88848535 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737218
chr16 88848191 88848535 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223750
chr16 88848200 88848510 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21737219
chr16 88848200 88848510 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108223751
chr16 88848218 88848482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737220
chr16 88848218 88848482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223752
chr16 88848233 88848477 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737221
chr16 88848233 88848477 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223753
chr16 88848266 88848530 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737222
chr16 88848266 88848530 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223754
chr16 88848276 88848451 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737224
chr16 88848276 88848451 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223756
chr16 88848284 88848488 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737225
chr16 88848284 88848488 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223757
chr16 88848342 88848449 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737228
chr16 88848342 88848449 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223760
chr16 88848370 88848784 ZNF274 GTRD no Bone Marrow (K562) 21737229
chr16 88848370 88848784 ZNF274 GTRD no Bone Marrow (K562) 108223761
chr16 88848370 88848901 ZNF274 GTRD no Bone Marrow (K562) 21737230
chr16 88848370 88848901 ZNF274 GTRD no Bone Marrow (K562) 108223762
chr16 88848370 88848901 ZNF274 GTRD no Bone Marrow (K562) 108223763
chr16 88848426 88848438 TAL1 JASPAR yes 12303930
chr16 88848426 88848438 TAL1 JASPAR yes 49418939
chr16 88848428 88848438 MSC JASPAR yes 12303931
chr16 88848428 88848438 TFAP4 JASPAR yes 12303932
chr16 88848428 88848438 MSC JASPAR yes 49418940
chr16 88848428 88848438 TFAP4 JASPAR yes 49418941
chr16 88848428 88848440 TAL1 JASPAR yes 12303933
chr16 88848428 88848440 TAL1 JASPAR yes 49418942
chr16 88848433 88848443 RELA JASPAR yes 12303934
chr16 88848433 88848443 RELA JASPAR yes 49418943
Genes associated with rs544040[chr16:88848433], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More