EnhancerDB
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  3. vista23606[chr17:232485-232614]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23606[chr17:232485-232614]
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Tissue distribution of vista23606
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Transcription factor that possibly regulate vista23606[chr17:232485-232614]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 232478 232493 FOXP1 JASPAR yes 21178822
chr17 232478 232493 FOXP1 JASPAR yes 52614169
chr17 232479 232490 FOXP2 JASPAR yes 21178823
chr17 232479 232490 FOXP2 JASPAR yes 52614170
chr17 232479 232491 FOXC2 JASPAR yes 21178824
chr17 232479 232491 FOXC2 JASPAR yes 52614171
chr17 232480 232491 FOXC1 JASPAR yes 21178825
chr17 232480 232491 FOXC1 JASPAR yes 52614172
chr17 232495 232501 SOX10 JASPAR yes 21178826
chr17 232495 232501 SOX10 JASPAR yes 52614173
chr17 232498 232511 ELF3 JASPAR yes 21178827
chr17 232498 232511 ELF3 JASPAR yes 52614174
chr17 232502 232508 ETS1 JASPAR yes 21178828
chr17 232502 232508 SPI1 JASPAR yes 21178829
chr17 232502 232508 ETS1 JASPAR yes 52614175
chr17 232502 232508 SPI1 JASPAR yes 52614176
chr17 232506 232516 NFKB1 JASPAR yes 21178830
chr17 232506 232516 NFKB1 JASPAR yes 52614177
chr17 232565 232577 GRHL1 JASPAR yes 21178831
chr17 232565 232577 GRHL1 JASPAR yes 52614178
chr17 232567 232586 RFX2 JASPAR yes 21178832
chr17 232567 232586 RFX2 JASPAR yes 52614179
chr17 232569 232584 RFX5 JASPAR yes 21178833
chr17 232569 232584 RFX5 JASPAR yes 52614180
chr17 232571 232587 RFX2 JASPAR yes 21178834
chr17 232571 232587 RFX3 JASPAR yes 21178835
chr17 232571 232587 RFX4 JASPAR yes 21178836
chr17 232571 232587 RFX5 JASPAR yes 21178837
chr17 232571 232587 RFX2 JASPAR yes 52614181
chr17 232571 232587 RFX3 JASPAR yes 52614182
chr17 232571 232587 RFX4 JASPAR yes 52614183
chr17 232571 232587 RFX5 JASPAR yes 52614184
chr17 232572 232591 RFX2 JASPAR yes 21178838
chr17 232572 232591 RFX2 JASPAR yes 52614185
chr17 232574 232589 RFX5 JASPAR yes 21178839
chr17 232574 232589 RFX5 JASPAR yes 52614186
chr17 232582 232585 MYB TRANSFAC yes 21178840
chr17 232582 232585 MYB TRANSFAC yes 52614187
chr17 232592 232607 ZIC3 JASPAR yes 21178841
chr17 232592 232607 ZIC4 JASPAR yes 21178842
chr17 232592 232607 ZIC3 JASPAR yes 52614188
chr17 232592 232607 ZIC4 JASPAR yes 52614189
chr17 232593 232607 ZIC1 JASPAR yes 21178843
chr17 232593 232607 ZIC1 JASPAR yes 52614190
chr17 232601 232615 IRF8 JASPAR yes 21178844
chr17 232601 232615 IRF8 JASPAR yes 52614191
chr17 232612 232630 ESR2 JASPAR yes 21178845
chr17 232612 232630 ESR2 JASPAR yes 52614192
SNP sites on vista23606[chr17:232485-232614]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 232512 rs541864649 T C
NFKB1
4683470
chr17 232571 rs560501347 C A,T
GRHL1 RFX2 RFX3 RFX4 RFX5
4683471
Genes possibly regulated by vista23606[chr17:232485-232614]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62293 236045 - RPH3AL ENSG00000181031.11 236045 0.83 1.0 15201 96569
chr17 260118 273510 + C17orf97 ENSG00000187624.7 260118 0.87 0.99 15202 72496
chr17 289769 295730 - FAM101B ENSG00000183688.4 295730 0.83 1.0 15203 36884
Expression level of Genes
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miRNAs possibly regulated by vista23606[chr17:232485-232614]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results