EnhancerDB
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  3. rs541864649[chr17:232512]
Enhancers that have rs541864649[chr17:232512]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 224801 234915 enh16912
Liver (HepG2) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Lung Placenta Pancreas Muscle (Myotube) Heart
chr17 232485 232614 vista23606
VISTA
Transcript factors that have rs541864649[chr17:232512]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 232131 232766 ZNF143 GTRD no Epithelial (MCF-7) 21738980
chr17 232131 232766 ZNF143 GTRD no Epithelial (MCF-7) 108227633
chr17 232165 233273 ZBTB33 GTRD no Lung (A549) 108227634
chr17 232247 232723 ZNF143 GTRD no Epithelial (MCF-7) 21738981
chr17 232247 232723 ZNF143 GTRD no Epithelial (MCF-7) 108227635
chr17 232262 233242 ZBTB33 GTRD no Lung (A549) 108227636
chr17 232397 232737 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21738982
chr17 232397 232737 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108227637
chr17 232399 232848 ZNF143 GTRD no Epithelial (MCF-7) 21738983
chr17 232399 232848 ZNF143 GTRD no Epithelial (MCF-7) 108227638
chr17 232430 232886 ZNF143 GTRD no Epithelial (MCF-7) 21738984
chr17 232430 232886 ZNF143 GTRD no Epithelial (MCF-7) 108227639
chr17 232432 232762 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108227640
chr17 232506 232516 NFKB1 JASPAR yes 21178830
chr17 232506 232516 NFKB1 JASPAR yes 52614177
Genes associated with rs541864649[chr17:232512], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More