EnhancerDB
  1. Home
  2. Enhancers
  3. vista23630[chr17:872760-873162]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23630[chr17:872760-873162]
Back to top
Tissue distribution of vista23630
Back to top
Transcription factor that possibly regulate vista23630[chr17:872760-873162]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 872754 872767 EOMES JASPAR yes 21179837
chr17 872754 872767 EOMES JASPAR yes 52647191
chr17 872756 872766 TBR1 JASPAR yes 21179838
chr17 872756 872766 TBR1 JASPAR yes 52647192
chr17 872756 872767 TBX2 JASPAR yes 21179839
chr17 872756 872767 TBX2 JASPAR yes 52647193
chr17 872757 872767 TBX21 JASPAR yes 21179840
chr17 872757 872767 TBX21 JASPAR yes 52647194
chr17 872781 872785 ESR1 TRANSFAC yes 21179841
chr17 872781 872785 ESR1 TRANSFAC yes 52647195
chr17 872784 872799 SOX21 JASPAR yes 21179842
chr17 872784 872799 SOX21 JASPAR yes 52647196
chr17 872784 872800 SOX4 JASPAR yes 21179843
chr17 872784 872800 SOX4 JASPAR yes 52647197
chr17 872805 872815 CLOCK JASPAR yes 21179844
chr17 872805 872815 MAX JASPAR yes 21179845
chr17 872805 872815 MLX JASPAR yes 21179846
chr17 872805 872815 MNT JASPAR yes 21179847
chr17 872805 872815 CLOCK JASPAR yes 52647198
chr17 872805 872815 MAX JASPAR yes 52647199
chr17 872805 872815 MLX JASPAR yes 52647200
chr17 872805 872815 MNT JASPAR yes 52647201
chr17 872806 872816 MAX JASPAR yes 21179848
chr17 872806 872816 MAX JASPAR yes 52647202
chr17 872807 872812 MYC TRANSFAC yes 21179849
chr17 872807 872812 USF1 TRANSFAC yes 21179850
chr17 872807 872812 USF2 TRANSFAC yes 21179851
chr17 872807 872812 MYC TRANSFAC yes 52647203
chr17 872807 872812 USF1 TRANSFAC yes 52647204
chr17 872807 872812 USF2 TRANSFAC yes 52647205
chr17 872807 872814 USF1 JASPAR yes 21179852
chr17 872807 872814 USF1 JASPAR yes 52647206
chr17 872812 872816 H4TF2 TRANSFAC yes 21179853
chr17 872812 872816 H4TF2 TRANSFAC yes 52647207
chr17 872816 872821 SP1 TRANSFAC yes 21179854
chr17 872816 872821 SP1 TRANSFAC yes 52647208
chr17 872820 872824 H1TF2 TRANSFAC yes 21179855
chr17 872820 872824 NFE TRANSFAC yes 21179856
chr17 872820 872824 SRF TRANSFAC yes 21179857
chr17 872820 872824 H1TF2 TRANSFAC yes 52647209
chr17 872820 872824 NFE TRANSFAC yes 52647210
chr17 872820 872824 SRF TRANSFAC yes 52647211
chr17 872830 872835 H4TF1 TRANSFAC yes 21179858
chr17 872830 872835 H4TF1 TRANSFAC yes 52647212
chr17 872834 872848 TCF7L2 JASPAR yes 21179859
chr17 872834 872848 TCF7L2 JASPAR yes 52647213
chr17 872848 872862 JUN JASPAR yes 21179860
chr17 872848 872862 JUN JASPAR yes 52647214
chr17 872848 872863 HNF1A JASPAR yes 21179861
chr17 872848 872863 HNF1A JASPAR yes 52647215
chr17 872850 872861 BATF JASPAR yes 21179862
chr17 872850 872861 BATF JASPAR yes 52647216
chr17 872852 872863 FOS JASPAR yes 21179863
chr17 872852 872863 FOS JASPAR yes 52647217
chr17 872854 872860 JUN TRANSFAC yes 21179864
chr17 872854 872860 JUN TRANSFAC yes 52647218
chr17 872858 872861 MYB TRANSFAC yes 21179865
chr17 872858 872861 MYB TRANSFAC yes 52647219
chr17 872866 872879 ZBTB18 JASPAR yes 21179866
chr17 872866 872879 ZBTB18 JASPAR yes 52647220
chr17 872867 872879 NHLH1 JASPAR yes 21179867
chr17 872867 872879 NHLH1 JASPAR yes 52647221
chr17 872868 872878 NHLH1 JASPAR yes 21179868
chr17 872868 872878 NHLH1 JASPAR yes 52647222
chr17 872880 872891 FOSL2 JASPAR yes 21179869
chr17 872880 872891 FOSL2 JASPAR yes 52647223
chr17 872881 872897 GLIS1 JASPAR yes 21179870
chr17 872881 872897 GLIS1 JASPAR yes 52647224
chr17 872889 872904 LEF1 JASPAR yes 21179871
chr17 872889 872904 LEF1 JASPAR yes 52647225
chr17 872910 872923 DUXA JASPAR yes 21179872
chr17 872910 872923 DUXA JASPAR yes 52647226
chr17 872926 872929 MYB TRANSFAC yes 21179873
chr17 872926 872929 MYB TRANSFAC yes 52647227
chr17 872931 872937 PEA3 TRANSFAC yes 21179874
chr17 872931 872937 PEA3 TRANSFAC yes 52647228
chr17 872969 872985 SOX8 JASPAR yes 21179875
chr17 872969 872985 SOX8 JASPAR yes 52647229
chr17 872984 872989 GATA2 JASPAR yes 21179876
chr17 872984 872989 GATA2 JASPAR yes 52647230
chr17 872996 873014 SRF JASPAR yes 21179877
chr17 872996 873014 SRF JASPAR yes 52647231
chr17 872998 873013 MEF2C JASPAR yes 21179878
chr17 872998 873013 MEF2C JASPAR yes 52647232
chr17 873013 873034 IRF1 JASPAR yes 21179879
chr17 873013 873034 IRF1 JASPAR yes 52647233
chr17 873017 873023 TBP TRANSFAC yes 21179880
chr17 873017 873023 TBP TRANSFAC yes 52647234
chr17 873019 873040 IRF1 JASPAR yes 21179881
chr17 873019 873040 IRF1 JASPAR yes 52647235
chr17 873023 873037 SPI1 JASPAR yes 21179882
chr17 873023 873037 SPI1 JASPAR yes 52647236
chr17 873057 873072 FOXP1 JASPAR yes 21179883
chr17 873057 873072 FOXP1 JASPAR yes 52647237
chr17 873060 873071 FOXP2 JASPAR yes 21179884
chr17 873060 873071 FOXP2 JASPAR yes 52647238
chr17 873061 873069 FOXO3 JASPAR yes 21179885
chr17 873061 873069 FOXO3 JASPAR yes 52647239
chr17 873062 873071 SRY JASPAR yes 21179886
chr17 873062 873071 SRY JASPAR yes 52647240
chr17 873062 873083 IRF1 JASPAR yes 21179887
chr17 873062 873083 IRF1 JASPAR yes 52647241
chr17 873064 873079 IRF9 JASPAR yes 21179888
chr17 873064 873079 IRF9 JASPAR yes 52647242
chr17 873066 873072 SOX10 JASPAR yes 21179889
chr17 873066 873072 SOX10 JASPAR yes 52647243
chr17 873066 873081 PRDM1 JASPAR yes 21179890
chr17 873066 873081 PRDM1 JASPAR yes 52647244
chr17 873080 873084 NFE TRANSFAC yes 21179891
chr17 873080 873084 NFE TRANSFAC yes 52647245
chr17 873081 873086 GATA2 JASPAR yes 21179892
chr17 873081 873086 GATA2 JASPAR yes 52647246
chr17 873138 873152 GATA2 JASPAR yes 21179893
chr17 873138 873152 GATA2 JASPAR yes 52647247
chr17 873139 873157 RARA JASPAR yes 21179894
chr17 873139 873157 RARA JASPAR yes 52647248
chr17 873140 873148 GATA3 JASPAR yes 21179895
chr17 873140 873148 GATA3 JASPAR yes 52647249
SNP sites on vista23630[chr17:872760-873162]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 872779 rs3853817 G A no 4688110
chr17 872793 rs564210418 G A,T
SOX21 SOX4
4688111
chr17 872807 rs77203487 G T
CLOCK MAX MLX MNT MYC USF1 USF2
4688112
chr17 872819 rs76634277 G A
SP1
4688113
chr17 872892 rs535525469 C T
GLIS1 LEF1
4688114
chr17 872912 rs117060155 T C
DUXA
4688115
chr17 873000 rs140144837 G A
MEF2C SRF
4688116
chr17 873027 rs76687287 A C
IRF1 SPI1
4688117
chr17 873056 rs150065367 C T no 4688118
chr17 873086 rs7210565 C T
GATA2
4688119
chr17 873160 rs541600426 T C no 4688120
Genes possibly regulated by vista23630[chr17:872760-873162]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 702553 883010 - NXN ENSG00000167693.12 883010 0.79 1.0 15209 90152
chr17 812872 814452 + RP11-676J12.7 ENSG00000262003.1 812872 0.97 1.0 15210 40112
chr17 900357 906911 + TIMM22 ENSG00000177370.4 900357 0.48 1.0 15211 72805
Expression level of Genes
Back to top
miRNAs possibly regulated by vista23630[chr17:872760-873162]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results